| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1076 |
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| Symbol | |
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| ID | 5704344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 1206680 |
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| End bp | 1208464 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641270591 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001535975 |
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| Protein GI | 159036722 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000337356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGGCCCGCA ACGAACGGAC GAGCCGATCC GAGGCACCCC ACTCACCGAA CGTGCTCCGG
GAGTACGCGC TACTCGCCGA CGGCCAGCGG GCGGCGCTGG TCGGCCCGGA CGGGAACATC
GTGTGGCTGT GTGCCCCGCG GTGGGCCGAC CCGCCGCTGT TCAGCAACCT CCTCGGCGGT
CGTGGCAGCT ACCTGGTGAC CCCGACGAAC CGACGCTTCG TGTGGGGTGG GCAGTACCAG
CCCGAGTCGT TGATCTGGAT CAACAGGTGG GTGACCACCG ACGGAATCAT CGAAACCCGA
GAGGCCCTGG CATTCCCCGG CGACGACCAG CGGGTGGTCC TGCTGCGCCA GGTCCACGCC
CTGGACCAGG ACGCCGCTGT TCGCGTGCAG CTCGACCCCA GAGCCGACTT CGGCCGAGAG
CCGATCCGTC AGGTGCGGCA GGATGGGGGG CTTTGGTGCG CCCAGACCGG GAACCTGTAC
CTGCGGCACA GCAGCGGGCA GCCGCTGGGC ACCGGCGCCG GGGGGCTGCT CTGCGGCGAG
TTGCGGGTGC CCGCTGGAGG GCGGGCCGAC CTGGTGCTGG AAATCTCCAC CCGGCCGCTC
GACGACGAGC CACCCCAACC ACCCGAGCTG TGGCGGATCA CGGAGAAATC CTGGCAGAGA
GTGCTGCACC CGCTGTCGCG CGGCACCGCG GGACGAGACG CGGTGTTCGC CTACACGGTG
CTGCGCGGGC TGACCCGGCC CGGCGGAGGA ATGGTGGCTG CGGTGACCGC GGGACTGCCG
GAGCGGGCGC TCGGCGGCCG CAACTACGAC TACCGCTACG CCTGGATCCG CGACCAGGCG
TTCGCCGGAC AGGCCGCCGC CCTGATCGGC CGGCACGAGC TCCTCGACGA CGCGGTAGCG
TTCCTCACCG ACCGGGTCCT CGCCGAGGGC GACCGGCTTG CCCCCGCCTA CACGATCGAC
GGCGGCCCGG TACCCCCGGA ACAGGAGCTG ACGTTCCTGC CCGGATACCC GGGCGCCAAG
GCGCGGACCG GCAACTGGGT GGGTGGGCAG TTCCAGTTGG ACGCCTACGG CGAGGTGCTG
TTGGTGCTGG CGACCGCCGC GAGCCACGGA CGGCTGGAAG CCACCTCCTG GCAGGCGCTG
ACGCTCGCCG CCCAGGTCAT CGAGGAACGC TGGCAACAAG CCGACTCGGG TATCTGGGAG
CTCCCTGCCC GACAGTGGAC CCACTCGAAG CTGACCTGTG TGGCCGGGCT ACGGGCTGCG
GCACGGATCG CGCCGGGCGG GCTGGCCGGC CGCTGGGTGG CCCTCGCCGA CACCATCGTC
GCCGACACCG CGGCCCACGC CCTCCACCCC TCCGGGCGCT GGCAACGCGC CTACGACGAC
CCGCGGGTCG ACTCGGCGTT GCTGCTGCCG GGAATCCGAG GTGCCCTGCC AGAGGGTGAT
CCACGTACCG AGGCGACCCG CCGCGCTGTC CTGGCCGAGC TGCAGCAGGA CGGCTACCTG
TACCGGTTTC GGCCGGATCG TCGCCCGCTC GGGGACGCCG AGGGGGCCTT CCTGCTCTGT
GGGTTCGCCG CGGCGCTCGC CGAGTGGCAG GCCGGCGACG CCGTCGCCGC GAACCGGTGG
TTCGAACGCA ACCGGGCGGG GTGCGGCCCG CCGGGGCTGT TCACCGAGGA GTTCGACGTG
GCACAGCGGC AGCTACGGGG CAACCTGCCG CAGGCGTTCG TGCACGCGCT GATGCTCGAA
ACCGCGGTGC GCCTCGGCCA CGCCGCCCCC TGCACGGCCG ACTAG
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| Protein sequence | MARNERTSRS EAPHSPNVLR EYALLADGQR AALVGPDGNI VWLCAPRWAD PPLFSNLLGG
RGSYLVTPTN RRFVWGGQYQ PESLIWINRW VTTDGIIETR EALAFPGDDQ RVVLLRQVHA
LDQDAAVRVQ LDPRADFGRE PIRQVRQDGG LWCAQTGNLY LRHSSGQPLG TGAGGLLCGE
LRVPAGGRAD LVLEISTRPL DDEPPQPPEL WRITEKSWQR VLHPLSRGTA GRDAVFAYTV
LRGLTRPGGG MVAAVTAGLP ERALGGRNYD YRYAWIRDQA FAGQAAALIG RHELLDDAVA
FLTDRVLAEG DRLAPAYTID GGPVPPEQEL TFLPGYPGAK ARTGNWVGGQ FQLDAYGEVL
LVLATAASHG RLEATSWQAL TLAAQVIEER WQQADSGIWE LPARQWTHSK LTCVAGLRAA
ARIAPGGLAG RWVALADTIV ADTAAHALHP SGRWQRAYDD PRVDSALLLP GIRGALPEGD
PRTEATRRAV LAELQQDGYL YRFRPDRRPL GDAEGAFLLC GFAAALAEWQ AGDAVAANRW
FERNRAGCGP PGLFTEEFDV AQRQLRGNLP QAFVHALMLE TAVRLGHAAP CTAD
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