Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0974 |
Symbol | |
ID | 5703700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1097316 |
End bp | 1098920 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641270490 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001535877 |
Protein GI | 159036624 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00760021 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGACAAC AATCGGTCGC GTCCCCATCG GGCGCGACGT CGGACAAGCT CGACGCCGCG GTACTCAAGG TGGCCGGCGT CGTCGTGCTC GGCGCGATCA TGTCGATTCT CGACGTGACG GTGGTCAGCG TCGCGCTGCC GACCTTCCAG AACGAGTTCG ACGCGTCCTA CGCCCGGGTG GCGTGGACGA TGACCGGCTA CACCCTCGCC CTGGCCACGG TGATCCCGCT GAGTGGGTGG GCCGCCAACC GGTTCGGCAC CAAACGCCTC TACATGGTCG CCCTGGCCCT GTTCACCATC GGCTCTGGCC TGTGCGCCAC CGCCGACACG ATCGGTCAGC TGATCGCGTA CCGGGTGCTG CAGGGACTCG GTGGCGGCAT GCTGATGCCC ATCGGTATGA CGATCATGAC GCGTGCGGCG GGGCCACACC GAATCGGCCG GCTGATGGCC GTCCTGGGCA TCCCGATGCT GCTCGGCCCG ATCGGCGGTC CGATCCTCGG TGGCTGGTTG ATCGACGTGG CGAGCTGGCA CTGGATCTTC CTGATCAACC TACCGATCGG GCTGATCGCA CTGGCCTACG CGCAGGCGGC CCTACCGAAG GACACCCCTG AGCCATCCGA GTCGTTCGAC TTCTTCGGCA TGCTGATGCT CTCCCCGGGG CTGGCGTTGT TCCTCTACGG CGTCTCCACG TTGCCCGAGG CGGGCACGTT CACCGACCCC GAGGTGTGGG TGCCGATGCT GCTCGGCGCC GCGCTGGTGG TGTCGTTCGT CCGCTACTCC TTCAAGCCGC AGCACCCGCT ACTCGACCTG CGGCTGTTCC GTAACCGCAG GCTGGCCGTC GCGTCCGTGG CGATGTTCGT GTTCATCGTC GCGTTCATGG GTGCCGGCCT GCTGTTCCCG AGCTACTTCC TGCAGGTTCG CGGCGAGTCG ACCCTGCACG CCGGCCTGCT GATCGCGCCG CAGGGAATCG GCGCGATGGT GACCATGCCG ATCGCCGGGA CGCTGGCTGA TCGGGTGTCG GTGGGCCGCA CAGTGCCGTT CGCGCTGGTG CTGCTCGCCG CCGGGTTCCT CACCTTCACC CAGGTCGGCC CGGACACCTC GTACCTGTTG ATCTGCGGTT CGCTGTTCGT CATGGGCCTG GGCATGGGCG GCACGATGAT GCCGATCATG ACGTCGGCAC TGCGGACGCT GACCGGGCAT GAAGTGGCCC GCGGGTCCAC GCTGCTGAAC ATCATCCAGC AGATTGGTGG TTCGGTCGGC GCGGCCGTGA TGTCGGTGAT CCTCACCAAC GAGCTGAACG GATCCCGGCC GATCCCTGGC CTCACCGACC CGAGCGGTGA GCCGATCACC GAGGCTGGCC TGGCGATCGC CGCCCAGCGG CAGCCGGAAC TGGCCCAGCA GGTTTCCGAC CCGACGCTCA TCGAGCGCGG GCTCGACTTC GCTGCCGAAT CCTTCGCCTC CACGTTCTGG GTGGCGTTCG TGCTGGTGCT GCTCACCTTC ATCCCGGTCG CGTTCCTGCC CCGGGGGCGG GAGCGGCCGC AGTCGCTGGA CGACCAACAG GGTGGCCAGC CGGGTGAGCC GAGCACGCCG GTCGTCGTGC ACTGA
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Protein sequence | MRQQSVASPS GATSDKLDAA VLKVAGVVVL GAIMSILDVT VVSVALPTFQ NEFDASYARV AWTMTGYTLA LATVIPLSGW AANRFGTKRL YMVALALFTI GSGLCATADT IGQLIAYRVL QGLGGGMLMP IGMTIMTRAA GPHRIGRLMA VLGIPMLLGP IGGPILGGWL IDVASWHWIF LINLPIGLIA LAYAQAALPK DTPEPSESFD FFGMLMLSPG LALFLYGVST LPEAGTFTDP EVWVPMLLGA ALVVSFVRYS FKPQHPLLDL RLFRNRRLAV ASVAMFVFIV AFMGAGLLFP SYFLQVRGES TLHAGLLIAP QGIGAMVTMP IAGTLADRVS VGRTVPFALV LLAAGFLTFT QVGPDTSYLL ICGSLFVMGL GMGGTMMPIM TSALRTLTGH EVARGSTLLN IIQQIGGSVG AAVMSVILTN ELNGSRPIPG LTDPSGEPIT EAGLAIAAQR QPELAQQVSD PTLIERGLDF AAESFASTFW VAFVLVLLTF IPVAFLPRGR ERPQSLDDQQ GGQPGEPSTP VVVH
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