| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0816 |
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| Symbol | |
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| ID | 5704120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 912932 |
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| End bp | 913585 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641270335 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001535726 |
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| Protein GI | 159036473 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0338425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCCTGC TACCAGGAGG CAGTGACCCG CACCGGTTCG GCACCGAGGC CTTCTACGCC
GCACTCGGCC GGTCCTTCGT CGCCATGTGC GCGGTGGTGC CGGTGCTCTA TCTCATCGAG
GCCGCCGACC AGGGCTTGGC GTTGGGGCTC GACGTGGCAG CCGGCATCCT CCCACGGCAC
CTCGATGGCC TCGACGGCGT CTTCTTCTCG CCCTTCCTGC ACCACGGCTT CAACCATCTC
AATGTGAACA GCATTCCGCT GATCCTGCTC GGCACCTTCG TGCTCGCGGC AGGCGTACGT
CGGTTCCTCT GGTCCACGCT GATCATTGTT CTGGTCAGCG GGCTCGGCGT CTGGTTCACC
GGTTCGCCAG ACACCGTCGT CGTCGGCGCA AGTGGCGTCG TCTTCGGCTA CCTGGGCATT
CTGCTCACCC GGGGCATCGT CGAGCGGAGC TGGTGGAACT TCGCGGTCTT CCTCCTGGTC
GGCCTGCTCG GTGGCTGGCA GCTCGTCGGC ATTCTGCCCA CCGACGAGCC GATCTCCTGG
CAGGGGCATC TCTTCGGGCT GCTGGGCGGG GTCGTCGCCG CGATCGTCTT CCGACGGCGC
GGGCCGGGCC TGGGCGGTCC GCGTTACTCG GAGTCGCGCC TCACGTTTCC TTGA
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| Protein sequence | MSLLPGGSDP HRFGTEAFYA ALGRSFVAMC AVVPVLYLIE AADQGLALGL DVAAGILPRH
LDGLDGVFFS PFLHHGFNHL NVNSIPLILL GTFVLAAGVR RFLWSTLIIV LVSGLGVWFT
GSPDTVVVGA SGVVFGYLGI LLTRGIVERS WWNFAVFLLV GLLGGWQLVG ILPTDEPISW
QGHLFGLLGG VVAAIVFRRR GPGLGGPRYS ESRLTFP
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