| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0800 |
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| Symbol | |
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| ID | 5706816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 898389 |
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| End bp | 898889 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641270319 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001535710 |
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| Protein GI | 159036457 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.271091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000467664 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCGGATG CCGACGGGTT CGACGAGTTC TACCGGGGCA GCCGACAGCG GCTGCTCGGG
TTCGTGTACG TACTCACCGG TGATCTCGCC GAGGCCCAGG ACGCGGTGCA GGAGGCGTAC
ATCCGGGCAT GGCAACGCTG GTCGACGGTG AGTGGGTACG ACGACCCGGA GGCGTGGGTG
CGGGTGGTGG CGAGCCGGAT CGCGGTCAGT CGGTGGCGCA GCCTGCGCAG TCGCGCTCGG
GCCTACCTGC GGCACGGCGC CACCGAGAGC GTGCCCGGTC CGAACCCCGA CGCGGTGGCG
GTGGTCGCCG CGCTGCGTCG GCTGCCAGAG GAGCAGCGCA TCGCGATCGC GCTCTACTAC
CTGGTGGGGA TGCCCGTCGT GGAAGTTGCC CGGGAGACCA ACGCCCCGGT CGGCACCGTC
AAAGCCCGGC TCTCCCGCGG CCGGGCTGCC CTCGCCGGGC TGCTTGCCGT CGTCGACCTG
GAGGAGGCTG TCGATGCGTG A
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| Protein sequence | MPDADGFDEF YRGSRQRLLG FVYVLTGDLA EAQDAVQEAY IRAWQRWSTV SGYDDPEAWV
RVVASRIAVS RWRSLRSRAR AYLRHGATES VPGPNPDAVA VVAALRRLPE EQRIAIALYY
LVGMPVVEVA RETNAPVGTV KARLSRGRAA LAGLLAVVDL EEAVDA
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