Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0787 |
Symbol | |
ID | 5705030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 883763 |
End bp | 884209 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641270306 |
Product | DoxX family protein |
Protein accession | YP_001535697 |
Protein GI | 159036444 |
COG category | [S] Function unknown |
COG ID | [COG4270] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.639865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00402989 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTTCCAC TGATCACACT GGTGGCCGGC ACCGGGTTGG CCCGGCTGGC CGGCCTGGCC GGCGTGGGCG CGCTCGACGG CTGGCACCCC GCCCTGCGGG TGGGACTCGC CCTGATGCTG ACGGTCACCG GACTGGCGCA CTTCAGTGCG CGACGCCGGG CCGGCCTCGT CGCGCTGGTG CCACCACGGC TGCCCCACCC CCAGTTCCTG GTCACCCTCA CCGGGGTGCT GGAGTTGCTC GGCGCGGCGG CGCTACTCGC TCCACCCACC GCTCGGTGGG CCGCCGCCGG GCTGGCCGTC CTGATGCTCG CCATGTTCCC GGCGAACGTG TCGGGGGCAC GACGGAAGCT CACCCTGGCC GGCCGCCCAG TCACCCCGCT GCCTGCCCGT ACCGCGATGC AGGTGACGTT CGTCGCCGCA GCGGTCGCCA TTTCGCTTGG ATCCTGA
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Protein sequence | MVPLITLVAG TGLARLAGLA GVGALDGWHP ALRVGLALML TVTGLAHFSA RRRAGLVALV PPRLPHPQFL VTLTGVLELL GAAALLAPPT ARWAAAGLAV LMLAMFPANV SGARRKLTLA GRPVTPLPAR TAMQVTFVAA AVAISLGS
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