| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0546 |
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| Symbol | |
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| ID | 5705646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 618165 |
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| End bp | 619772 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641270072 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001535466 |
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| Protein GI | 159036213 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0457672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00344637 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGCCA TCGAGTCCAC CGATGTCGTG GTGATCGGCA GTGGCTTCGG CGGCGCGATC
GCCGCCTACC ACCTGGCCGC CGGTGGCGCC CGGGTCGTCG TGCTGGAGCG GGGCCCCTGG
CTCACCGCCC AGGACTTCGA CCACGATTTC CTGCTGGGCA CCTCGTACAC CCGGATCTTC
GACTTCGTGG TCGGGGACGG GATGAGCATT CTCAGCGGGA ACTGCGTGGG CGGTGGGAGC
GTGGTCTACT TCGCCACCAT GCCGCGCGCA CCGGGGTTCG TCTTCGAACG CCGGGGCAGT
ATCGGACGGC GGATGTGGCC CGCCGCGATC AGCCGGCAGA CTCTGGACCC GTGGTACGAC
CGGGTGAGCG AGTCGCTGCC GATCACCCAA CAGAGCTGGG ACCAGGTGCC GTACGCCGGT
GGTCTCTGGG CCGCTGCCTG CGCACACGCC GGGCGCACCG CCAACCCCGC GCCGAGCGCG
GTGGACGTTT CGCTCTGCAC GAACTGCAAC TGGATGATGG CCGGCTGCAA GTTCGATGCC
AAGCGCTCGC TACTACTGAA CTACCTGCCG GGTGCCCTGG CCCACGGAGC ACAGATCCGG
CCGATGCACG AGGTACAGCG GCTGAGCCGC AACGCCGACG GCGGCTACCG GGTGCACTAC
CGGATCGTCG ACGACGAGGA CTACCGGGTG CTGCACGACT CGGGCACGAT CGATGCCCGC
ATCGTCGTAC TCGCCGCCGG CACCGGTGCG ACCCCGGTGA TCCTCAGGCG GTCTGAGCCG
GATCTCGGTC CGATGCCGCA CGCGGTCGGC CGGTACTTCT CCGGCAACGG CGAACGGTTG
AACACAGCGG TGTTCGACGA GGACCGGGTG CGTGACGTCC TGAAACTCAG CCGGCCGGAC
GGATCCGCGT ACGGGGCGTA CCAGATCGGC CGTGGCCCGA CCGTGGCCAG TTGGGACCGG
CTGGACGGAA GCCTGCCGGA GTACGAACGC TTCTCGCTGG AACAGCTCTA CTTCCCGCCC
GGCCTCGGCA CGATCCTCGC CCAGGTCCCT GACGCCGACG CACCCACGTG GTTCGGCGTG
CAGAAGAAGG AGATGCTGAG CCGGTGGCCG TCGTGGCTGA CCGTCTTCAC GATGTCGGAG
GACGACAACG AGGGTGTTTT CGGGCCGCCG CCGGCCACCG GCAACGCCAC TCGGCTGTCG
CAACAGATGC TCGGAGACGG CCCGTTGCGA TACCGGCCGA CAGCAAACAC CCAGCGCGGC
TGGGACCTGT CGGACGCCGA GGTCAAGGAC ATTCTGGAAC GCGACGGGCT GGCTCGCGTA
CGGCCGTGGA CCAACGATCT GATCGGCGCG TACACAGTGC ACCCGCTGTC GTCGTGCCGG
ATCGGCGACG ATCCACAGAC ATCCGCCCTG AACGACGGGC ACGAGCTGCG CAACCATCCC
GGGATCTTCG TTACCGACGG TTCCGCGGTG CCGGGGGCGT TGACGGTCAA CCCCGCCCTG
ACCATCTCCG CCCTGGCGGA GCGGGCCGTC CCGGGCATCG TCCGGGCCGC GGCGGAACGA
GGAGTGCCGG TGCGATACGG GGCGCCGGTA CCGGCCGGGG TCTCCTGA
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| Protein sequence | MSAIESTDVV VIGSGFGGAI AAYHLAAGGA RVVVLERGPW LTAQDFDHDF LLGTSYTRIF
DFVVGDGMSI LSGNCVGGGS VVYFATMPRA PGFVFERRGS IGRRMWPAAI SRQTLDPWYD
RVSESLPITQ QSWDQVPYAG GLWAAACAHA GRTANPAPSA VDVSLCTNCN WMMAGCKFDA
KRSLLLNYLP GALAHGAQIR PMHEVQRLSR NADGGYRVHY RIVDDEDYRV LHDSGTIDAR
IVVLAAGTGA TPVILRRSEP DLGPMPHAVG RYFSGNGERL NTAVFDEDRV RDVLKLSRPD
GSAYGAYQIG RGPTVASWDR LDGSLPEYER FSLEQLYFPP GLGTILAQVP DADAPTWFGV
QKKEMLSRWP SWLTVFTMSE DDNEGVFGPP PATGNATRLS QQMLGDGPLR YRPTANTQRG
WDLSDAEVKD ILERDGLARV RPWTNDLIGA YTVHPLSSCR IGDDPQTSAL NDGHELRNHP
GIFVTDGSAV PGALTVNPAL TISALAERAV PGIVRAAAER GVPVRYGAPV PAGVS
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