Gene Sare_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0474 
Symbol 
ID5705133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp543429 
End bp544298 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content67% 
IMG OID641269999 
Productpeptidase M48 Ste24p 
Protein accessionYP_001535394 
Protein GI159036141 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.14088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACCATA ACCGTCTGAA GACCGCCGCG CTGCTCGGCC TGCTCACCGC CCTGATCCTG 
GCGGTGGGCT ACTGGTTCGG CGGCAGTGGC GGGCTGGTCA TCGCCGTCTT CATCTCGCTG
GCGATGAACG GCGTCAGCTA CTTCTACTCC GACAAGCTCG CTCTACGCGC GATGCGGGCG
CAACCGGTCA GTGAGGCCCA GTTCCCCGAG CTCTACCAGA TGGTGCGGGA ACTGGCCGTC
GAGGCGCGGC AACCGATGCC CCGGCTCTAC GTGAGCCCGA CCAATCAGCC CAATGCATTT
GCAACCGGCC GAAACCCGCA GAACGCCGCC GTTTGTGTCA CCCAGGGGAT CGTGGAGATC
CTCGACTACC GTGAGCTGCG CGGGGTCATC GGACACGAGC TGTCACACGT CTACAACCGG
GACATTCTCA TCTCCAGCGT AGCTGCCGGC CTGGCCGGCA TCATCACCGC GCTGGCCAAC
CTGGCGTTCT TCATCCCGCT CGGCGGTGAC GACGAGGATG GCCGGAACCC GGCCGTGCTG
CTGCTGACCA TCATCCTCGG GCCGATCGCG GCCACGCTGA TCCAGCTCGC GATCGGCCGT
AGCCGAGAGT TCCAGGCCGA CGCATCCGGC GCCCAGCTCA CCCGGGATCC GCTGGCGTTG
GCCAGTGCCC TCCGAAAGAT CCATAAGGGC ACCCAGGCGC GCCCGCTGCC GCCGCAGGGA
CAGCTCACCA GCGCCGCCCA CCTCATGATT GACAACCCGT TCAAGGGTGG TGGCGTGGCC
GCGCTGTTCT CCACCCATCC ACGGATGGAG GAGCGGGTCG CCCGGCTGGA GCAGATGGCC
GGCAACACCG GCCCGATCCA GTACCGCTGA
 
Protein sequence
MHHNRLKTAA LLGLLTALIL AVGYWFGGSG GLVIAVFISL AMNGVSYFYS DKLALRAMRA 
QPVSEAQFPE LYQMVRELAV EARQPMPRLY VSPTNQPNAF ATGRNPQNAA VCVTQGIVEI
LDYRELRGVI GHELSHVYNR DILISSVAAG LAGIITALAN LAFFIPLGGD DEDGRNPAVL
LLTIILGPIA ATLIQLAIGR SREFQADASG AQLTRDPLAL ASALRKIHKG TQARPLPPQG
QLTSAAHLMI DNPFKGGGVA ALFSTHPRME ERVARLEQMA GNTGPIQYR