Gene Sare_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0452 
Symbol 
ID5705449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand- 
Start bp518941 
End bp519579 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content70% 
IMG OID641269977 
ProductTetR family transcriptional regulator 
Protein accessionYP_001535372 
Protein GI159036119 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.681881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.00000297509 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCGCTG TGGGGAACGG CGCCCAGACT GCCGGCCGGC CCACCCGCCT ACCCCGGTCA 
GCTCGCCGCA GGCAGTTGCT CGCCGCGGCG CAGGAGGTGT TCGTCGCGCA GGGGTACCAC 
GCGGCCGCGA TGGACGACAT CGCCGAACGC GCGGGGGTCT CCAAGCCGGT GCTGTACCAA 
CACTTCCCCG GCAAGATGGA GCTCTACCTG GCGCTGCTCG ACACCCACTG CGACGCCATC 
GTGGCGAAGG TGCAGGAAGC GATGCGCAGC ACCACCGACA ACAAGGAGCG TGTCAGCGCC 
TCCGTCCGTG CCTACTTCGA CTTCGTCGAC CACGAAAGCG AGGCGTTCCG CCTGGTCTTC 
GAGTCGGACC TCCGTAACGA TCCGGCGGTG CGGCAGCGGG TCGAGCGGGT CGAGCAGGGC 
TGCATCGCGG CGATCACCGA CACGATCATC TCGGACACCG GTGTAAGCCG GGCACACGCC 
GAGCTGCTGG CCTCCGGACT GGTCGGGGCG GCCGAGACTG CGGCGCAGTT CTGGCTGGCC 
AGGGGCCGGC GGGTGGCGAA GGCGGAGGCG GAGTCGTTGG TCGCCGCGCT CTCCTGGCGG 
GGCATCGCGA GCTTCCCGCT GCAAGGTGAG TCAGCCTGA
 
Protein sequence
MTAVGNGAQT AGRPTRLPRS ARRRQLLAAA QEVFVAQGYH AAAMDDIAER AGVSKPVLYQ 
HFPGKMELYL ALLDTHCDAI VAKVQEAMRS TTDNKERVSA SVRAYFDFVD HESEAFRLVF 
ESDLRNDPAV RQRVERVEQG CIAAITDTII SDTGVSRAHA ELLASGLVGA AETAAQFWLA 
RGRRVAKAEA ESLVAALSWR GIASFPLQGE SA