| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0445 |
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| Symbol | |
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| ID | 5705315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 510611 |
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| End bp | 511357 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641269970 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001535365 |
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| Protein GI | 159036112 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.421209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000984916 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCGAGC GGCTGGCCGT GGTCAGTGGC GGCGGTACCG GGATCGGGGC GGCCATCGCT
CGGGTGCTGG CCGTTGACGG GTTCGATGTG CTCGTCGTGG GCCGGCGGGA GGAGGCGCTG
CGGGCTACCA CGGCCCGGAT TTCCTGGGAT ATCGCCCGAC CCGGCGCGGT CCGGGCGGTG
GTGGCGGACC TGGCCGATCC GGAACAGGTC TCCCGGGTGG CCGAGACGGT CGAGGGCCGG
GCCGTCGACG CGGTGATCAA CAACGCCGGG AGCTACCGCG GCGGGGATTC CGGCACCCTG
GCCGGAGTCG CCCACCAGTG GCGGGCCAAT CTCGACGCGA ACATTCTCAC CGCCGTCCTG
CTCACCGAGG CGCTCCGGCC GGCGTTGCGG CGCCCCGGCG GCCGAGTGAT TCTGGTCAGC
TCGATCGCGG CGCAGCAGGG TGGCGGCGGG CCGTACTCCG CGGCGAAGGC CGCGTTGCAC
GGCTGGGCGT ACGACCTGGC GGCCCAGCTT GGGCCGGAGC AGATCACGGT CAATGTGGTC
AGCCCCGGGT ACGTCACGGA CACCGAGTTC TTCGGCGGCC GGATGACGCC CCAGGGACAC
GCCAGACGGG TCGCGGCCAC GCTGGTCGGG CGAGCCGGTA CCCCAGACGA CATCGCCGAG
GCGGTCCGCT ACCTCGCCGG TCCCGCCGCA GGCTACGTCA CGGGGCAGGT CCTCGGCGTC
AACGGCGGGT CGGTCCTGGG TCGGTGA
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| Protein sequence | MGERLAVVSG GGTGIGAAIA RVLAVDGFDV LVVGRREEAL RATTARISWD IARPGAVRAV
VADLADPEQV SRVAETVEGR AVDAVINNAG SYRGGDSGTL AGVAHQWRAN LDANILTAVL
LTEALRPALR RPGGRVILVS SIAAQQGGGG PYSAAKAALH GWAYDLAAQL GPEQITVNVV
SPGYVTDTEF FGGRMTPQGH ARRVAATLVG RAGTPDDIAE AVRYLAGPAA GYVTGQVLGV
NGGSVLGR
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