| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0267 |
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| Symbol | |
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| ID | 5705282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 295867 |
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| End bp | 297369 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641269795 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_001535190 |
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| Protein GI | 159035937 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0141639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGCGAC CCGACCTGCT GGCTACCCTG GATCACGGTA CCGGCACCCC CGGGCCACCT
CCGACCTGGG ACAACATTCA CGTGGATCAC GAACGAGTCA TCCGTGACGG CACGGCCCGC
CTGTCGATGG CGTCGAACGT CACCGAGGCA TGCCAGTGGA CCGTCGCCGC CCTGGCCCGG
TATGCCCCGG CCACCATCTC GGTGCTCCTT GAGGTCCACG ACCGGCTCCG CTGCATCGCG
GCCACCGGCT CGTGGCAGGT TTTCTCGACC GTCCCGCCGG CCACCGGCGT CGTCGGACGA
GTGCACACCA CCGGTCACAC CGTAGTCGCC ACCGACGTCG CCGCGGACCC GGACCACCTC
CCGGTACGCC CGGACGTCAC CAGTGAGGTG TGCGTACCGG TGCCGGGCCC GTCCGGACGG
CCAGTCGGCG TCCTCGACCT GCTGTGGAGC GAACCGGCGG ATCTGGCGGC GTGGCGGAAC
ACCGCCGAAC GCCTCGCGGA GCGCCTCGGG GCACGGATCG TCGCGCTCGG CGGCCCACCG
ACGGAGACCC GAGGCGAGAA GCTGCTGCGG CACGCCGCCG CACTGGCCAC CGCCCCCACC
GAGTGGGAGC TGCGGCACGC GGCCGTCACG GCCGCACGGG AGGTGTCGAC TCTCTCCGCC
GCCGTCCTGG TGCTCGCCGG GCACCGGGGG CCTCGGCTGG CCGAACCGAC CACCACCCCG
AGTGAGCTGG AGGCCCGGAT CCGGGCCTCG TTGTCCGAGG CCGGCTCGGG GGCACTGGGA
CGGATGGTCG ACCTGGCCCA CCGCTACGGG GCCGGTTACA CGCTCGGTGA GACCGGACAG
CCGACGGGTG ACGACCACGC CGCGCTGGCC CGGGCCGGGG TACGCACGCT GGTGGCGGTG
CCGGTCGGTT CGGCCGACGA CGCCGGGTTG CTGCTGGTCG CCGACGAGCG ACGGCTGCGT
CCCGACCCGA CCACCGTCAA CCTGATGGAG TTGCTCGCCG GTCAGGCGTG CAGCGCCCTG
GACCGGCTCC ATGCCGTGGC CCGGCTCCGC GAGCAGGCCA GCTCGGACCC GTTGACCGGG
CTACGGCACA CCGGGCCGTT CGGGGAGCGG ATCGCGGCGG CCACCCCCGG GCGTACCGCC
CTGCTCGCGA TCGACGTGGA CGGCTTCAAA AGCGTCAACG ACACGTACGG GCATCAGGCC
GGTGACCGGG TACTGGTCGA CCTGGCGCGG GCGTTGGAGG GCGCGTTGCG TCAGAACGAC
GAACTGTACC GAACCGGGGG CGACGAATTC GTGGCGGTGA TCGAGGTGAA CCGTCCGGAG
GAGGCCGTTC GGGTCGCCGA ACGCCTCACC GAGGCGGCCC GCCGGATCGG CCGCACCATC
AGCGTGGGCG TCGCCCTGCC CCACCCCGAC GAGCCCGCCG ACCGCACCCT GCACCGCGCC
GATCAGGCCC TCTATCGGGT GAAACGTGAA GGCCGTGACG GCGTGCGGAT GGCTGCCGCC
TGA
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| Protein sequence | MGRPDLLATL DHGTGTPGPP PTWDNIHVDH ERVIRDGTAR LSMASNVTEA CQWTVAALAR
YAPATISVLL EVHDRLRCIA ATGSWQVFST VPPATGVVGR VHTTGHTVVA TDVAADPDHL
PVRPDVTSEV CVPVPGPSGR PVGVLDLLWS EPADLAAWRN TAERLAERLG ARIVALGGPP
TETRGEKLLR HAAALATAPT EWELRHAAVT AAREVSTLSA AVLVLAGHRG PRLAEPTTTP
SELEARIRAS LSEAGSGALG RMVDLAHRYG AGYTLGETGQ PTGDDHAALA RAGVRTLVAV
PVGSADDAGL LLVADERRLR PDPTTVNLME LLAGQACSAL DRLHAVARLR EQASSDPLTG
LRHTGPFGER IAAATPGRTA LLAIDVDGFK SVNDTYGHQA GDRVLVDLAR ALEGALRQND
ELYRTGGDEF VAVIEVNRPE EAVRVAERLT EAARRIGRTI SVGVALPHPD EPADRTLHRA
DQALYRVKRE GRDGVRMAAA
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