Gene Sare_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0227 
Symbol 
ID5705989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp258751 
End bp259521 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content73% 
IMG OID641269756 
Productpeptidase M23B 
Protein accessionYP_001535153 
Protein GI159035900 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0890169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0248143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCGC CGCTGACCGG CCGCCGCCTG GCGTACCCGC TCCTGTTCCT ACTCGCCTCG 
ATGCTCGCCG CCAGCTGCGC GACGACTCGT CCCGGGGCGA GTCCTGGCAC TGCCAGCAGC
CCAGCCACCA CGCAGCCGGC CACCCCGACC GGATCGGCCG CCCCGACCGG ATCGGCCACC
CCGGCCGGAT CGACCCCGTC GGATGGATCG GCCCCGCCGA CCGCGGCGGC GACCCCACCG
GTGACGCCGT CCGCTGAAAT CCGGCACGTC TTCCCGGTAC GCGCCGGCAA CGCCTCCTAC
CATCCGACCC ATTCGGTCTA CCCCGCCACG GACATTTTCG CCGACTGCGG CGTACCGGTC
GTGGCGGTGA CCGACGGTTC GGTGCTGGAG GTGAGCCGGG TGGACCGGTT CAACCGGGGC
GGTCCCCGCG GCCCGTTCAA CGGTGGCCTG TCGGTGGCGG TGCTGGGCGA CGACGGGGTG
CGCTACTACG GCTCGCATCT GACCGAGGTC GCGGCGGGCC TCGATCCGGG GGTACGCGTC
CGCGCCGGCC AGCAACTCGG CACGGTTGGC CGCACCGGCA ACGCGAACAA CGTGTGCCAC
CTGCACTTTG GTATCTCACC GCCGTGCCCC GGGAAGGACG GCTGGTGGAT CCGGCGGGGG
GTGGTGTGGC CGGCGCCCTA CCTGGACGCG TGGCGGCGTG GGATCAACCG GTCGCCCGCG
GTGGAGGTGG CTGCCTGGCA GCGCCGACAC GGTTGTCCCA AGGAGCCATG A
 
Protein sequence
MPAPLTGRRL AYPLLFLLAS MLAASCATTR PGASPGTASS PATTQPATPT GSAAPTGSAT 
PAGSTPSDGS APPTAAATPP VTPSAEIRHV FPVRAGNASY HPTHSVYPAT DIFADCGVPV
VAVTDGSVLE VSRVDRFNRG GPRGPFNGGL SVAVLGDDGV RYYGSHLTEV AAGLDPGVRV
RAGQQLGTVG RTGNANNVCH LHFGISPPCP GKDGWWIRRG VVWPAPYLDA WRRGINRSPA
VEVAAWQRRH GCPKEP