Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0227 |
Symbol | |
ID | 5705989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 258751 |
End bp | 259521 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641269756 |
Product | peptidase M23B |
Protein accession | YP_001535153 |
Protein GI | 159035900 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0890169 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0248143 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCGC CGCTGACCGG CCGCCGCCTG GCGTACCCGC TCCTGTTCCT ACTCGCCTCG ATGCTCGCCG CCAGCTGCGC GACGACTCGT CCCGGGGCGA GTCCTGGCAC TGCCAGCAGC CCAGCCACCA CGCAGCCGGC CACCCCGACC GGATCGGCCG CCCCGACCGG ATCGGCCACC CCGGCCGGAT CGACCCCGTC GGATGGATCG GCCCCGCCGA CCGCGGCGGC GACCCCACCG GTGACGCCGT CCGCTGAAAT CCGGCACGTC TTCCCGGTAC GCGCCGGCAA CGCCTCCTAC CATCCGACCC ATTCGGTCTA CCCCGCCACG GACATTTTCG CCGACTGCGG CGTACCGGTC GTGGCGGTGA CCGACGGTTC GGTGCTGGAG GTGAGCCGGG TGGACCGGTT CAACCGGGGC GGTCCCCGCG GCCCGTTCAA CGGTGGCCTG TCGGTGGCGG TGCTGGGCGA CGACGGGGTG CGCTACTACG GCTCGCATCT GACCGAGGTC GCGGCGGGCC TCGATCCGGG GGTACGCGTC CGCGCCGGCC AGCAACTCGG CACGGTTGGC CGCACCGGCA ACGCGAACAA CGTGTGCCAC CTGCACTTTG GTATCTCACC GCCGTGCCCC GGGAAGGACG GCTGGTGGAT CCGGCGGGGG GTGGTGTGGC CGGCGCCCTA CCTGGACGCG TGGCGGCGTG GGATCAACCG GTCGCCCGCG GTGGAGGTGG CTGCCTGGCA GCGCCGACAC GGTTGTCCCA AGGAGCCATG A
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Protein sequence | MPAPLTGRRL AYPLLFLLAS MLAASCATTR PGASPGTASS PATTQPATPT GSAAPTGSAT PAGSTPSDGS APPTAAATPP VTPSAEIRHV FPVRAGNASY HPTHSVYPAT DIFADCGVPV VAVTDGSVLE VSRVDRFNRG GPRGPFNGGL SVAVLGDDGV RYYGSHLTEV AAGLDPGVRV RAGQQLGTVG RTGNANNVCH LHFGISPPCP GKDGWWIRRG VVWPAPYLDA WRRGINRSPA VEVAAWQRRH GCPKEP
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