| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3626 |
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| Symbol | |
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| ID | 4605873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4268462 |
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| End bp | 4269058 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639783047 |
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| Product | multiple antibiotic resistance (MarC)-related protein |
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| Protein accession | YP_929498 |
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| Protein GI | 119776758 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2095] Multiple antibiotic transporter |
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| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.416857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATATTT TTTCCGCCGC CGTAATGTTG TTTTTGATTA TGGATCCTCT GGGCAATCTG
CCCATATTTG CCTCTATTTT GCGGCATATT GATCCTAAAA AACGTCGTAA GGTGTTGATC
CGTGAGCTGC TGTTTGCGCT CGTCATCATG CTGATGTTCC TGTTTGCCGG TGAAGCCATA
CTCAATTTCC TTAATCTGCG CTCCGAATCT GTGAGTATCG CCGGGGGCAT CATTCTGTTT
CTGATTGCCA TTAAGATGAT TTTCCCAAGT CCGGGAGGCG TAACAGGTCT GCCGGCAGGG
GAAGAGCCTT TTATCGTGCC CATGGCGATT CCATTGATGG CCGGCCCTTC GATTCTGGCG
GCATTGATCC TGCTGGCCCA TACCGACAGC AGCCGTATGT TGGACTGGAC CATAGCCCTG
GTGTCTGCCT GGGGGGTAAG CGCCTTTATT TTGATGTTTT ATAAAGGCTT TACCCGGATA
CTCGGTGAAA AAGGCTTAAC CGCCGTTGAG CGTTTGATGG GCATGGTGCT GGTAATGATT
TCGGTGCAGA TGTTCCTCGA TGGCGTGGCC AACTACCTCA ATAAATCGGT CAGTTAA
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| Protein sequence | MDIFSAAVML FLIMDPLGNL PIFASILRHI DPKKRRKVLI RELLFALVIM LMFLFAGEAI
LNFLNLRSES VSIAGGIILF LIAIKMIFPS PGGVTGLPAG EEPFIVPMAI PLMAGPSILA
ALILLAHTDS SRMLDWTIAL VSAWGVSAFI LMFYKGFTRI LGEKGLTAVE RLMGMVLVMI
SVQMFLDGVA NYLNKSVS
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