Gene Sama_3610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3610 
Symbol 
ID4605857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4249613 
End bp4249807 
Gene Length195 bp 
Protein Length64 aa 
Translation table11 
GC content62% 
IMG OID639783031 
Producthypothetical protein 
Protein accessionYP_929482 
Protein GI119776742 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02811] formate dehydrogenase region TAT target 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA CCCCCAACAG CGCAGAGCGC CGGGCGTTTC TCAAGACCAT GGCCATGGGC 
AGTGTTGCCG GTGTAGCAGT GGCCACTTGT GGCAGCGCGG TGGCACAGCC ACTCGAGTCT
GCGCCTGCCC AGTCCAAGGG CTATCGCGAG ACAGACCATG TCCGCCGTTA TTACGCCAGC
TTACGCGGCG AGTAA
 
Protein sequence
MKTTPNSAER RAFLKTMAMG SVAGVAVATC GSAVAQPLES APAQSKGYRE TDHVRRYYAS 
LRGE