| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3540 |
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| Symbol | |
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| ID | 4605787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4170831 |
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| End bp | 4173137 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782961 |
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| Product | penicillin amidase |
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| Protein accession | YP_929412 |
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| Protein GI | 119776672 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2366] Protein related to penicillin acylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAAG CCATCAAATG GGCACTGCTG CTGGTATTCG TGGTGTGCGC CAGTCTGTAT
TTCGCCTTTC GCGCCAGTCT GCCTGAACTC AGTGGCAACA CTATCGCCCC AGGGCTGGAG
CAGGCTGTCG ACATCGAGCG CGATACTCTG GGTACGGCCA TCATTCGGGC TCAAAGCCGA
CGCGACGCAG CCTTTGGGTT GGGCTATGCC CACGGACAGG ACAGATTTTT TCAGATGGAT
TTGCTGCGCC GCAACTCAGC TGGCGAGCTG GCCGAGCTCT TTGGCGATGG GGCGCTGACC
CTTGATGAGC GCCACCGCTT TCACCAATTC AGAAAGCGTG CCCGGGCGCT GCTGTCGCGC
CTGCCTGCAA AAGACAGAGC CGTGCTGGAA GCCTATAGCC TCGGCGTCAA TCAGGCACTG
TCGCAGCAAA CCCTGCCCAG TTTTGAGTAC CTGCTGAGCG GTGGTGAAAT CACGCCCTGG
CAACCCGAAG ACAGCCTGCT GACTATCTTC TCCATGTATC TGGATTTACA GGGGAACACG
GTTGAACGTG AACTGGTACT GGAGCGCATC AAACAGCTTT ATGGTAATGA AATGCTCGCC
TTCGTCAGCC AGAACGATCC TATTCAGGCA GCATTGGACG GCAGTACCTT ACCCACCCAG
GCAATGGTGG CGCCCACCTT ATCGGCCACC GCGCTCGATA GAGCACAGCA AAGCCCCATT
GGCAGCGAAC TCGATGCCTT TGTTAAGGGC AGCAACAACT GGGCGGTCAC GGGTCAACTT
ACCCAGTCCG GACACGCCAT GCTGTCGGAT GATATGCACC TCGGCCTCGC GGTCCCCATT
ATCTGGTACA GAGCCCAACT CAATTACCGC CATCAAGGCG GTGAAACCGG CGAGCGCGAC
ATTCAGGTCA CAGGTGTGAG CCTGCCAGGC GCTCCTGTGA TTGTGGTGGG CACCAATGGT
CGTATCGCCT GGGGCTTTAC CAACGGCTAT ATCGACACTG CAGACTGGAT TGAGCTGGAC
GGCAACGAAG AAACAGAGAT CGTCACAGAA CAGCTCAAAA GCAAAGGCAC GGGTAAAGAG
ATGGCGCTCA AGTTATCCCG CTTTGGCCCG GTAAAACGCC TCGGCGACAA AGACTATGCG
CTGTCCTGGG TGGCCCACGG CGACTTTGCC ATTAACCTCA ACCTGATGCA TCTGGAAACC
GCCACCCACG TGGATGAGGG ACTTAAACTC ACCCGGCACA CGGGGATCCC GGTGCAGAAC
ATGCTGATAG TGGATGAGGC CGGTAATGCG GCCTGGCGCC TGACCGGTGC CATTTCGGCG
CGGGATAACC CGACTCAAAC TGCACAGTCA GCCGATGGCT GGCAAGCCGA TAGGTGGGCA
GTACCTGCTG AAGATGTGCC CGTTGTCAGT AACCCCGCCA ATCAACGGCT ATGGAGCGCC
AATAGCCGTG TGCTGTCGGT ATCAGACACC CAACGCTTCG GCGATGGCGG TTACGCCATC
GCCAGTCGTG CTGCGCAAAT TCGCGATACC CTGCAGACCA AAGACAGTTT CGACGAGCGG
GACTTTCTCG CGATGCAACT GGATAACCGG GCGCTGTTTC TTGCTCCCTG GCATCAGCTG
TTGACCGACA CACTGGAAAA GCAACAGGAT GAATTTGCGG ATGACCTCAA GGCGCTGGCC
AGTTGGGGCG GCTGTGCCTG CAGCGATTCG GTGGGCTACC CCCTGGTAAA CAGTTTCCGT
ATTCGGGTCA TGGACAGCCT GTTTGCCCCG TTGCAAACCC GCCTCGCCGA AGAAGGTCTC
AGCCTGAGCA AAATCAAGGG GAATCTGGAA GTGTCCGTAT GGCAATTGCT CCGCCAACAG
CCAGAATCCT GGCTTCCCGA GAAAATGGCC GACTGGGACA GCTACCTGCT GCAGATTTAC
CGCCATAATC GGGCTGAACT GCTAAGCCGC CATTCTCAAG CAGGTAAGCT TGCCGATCTC
AATTGGGGCA AGGTTAACGC GCTCAAAATA CAGCACCCTT TCAGCAAGCA GATCCCGCTG
TTGGCGCCGC TGTTGGACAT GCCACAGGTG CCGGGTTTTG GAGGCCACTT CGAACCCGCA
GTACAAAGCT CAGGCTTTGG CGCCTCCCAG CGTCTTATCG TGCAGCCGGG GCGCGAATCC
AATGGCATCC TGATGGTACC GGGCGGTCAA TCGGGCCATC CGTTATCGCC CTATTACCGC
AGTGGCTTTG ACGATTACGC CAATCACAGG CCAACACCCT TACTGCCTGG CGAGGTAAAA
CACATGCTGC GTTTATCCCC GCAGTAA
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| Protein sequence | MLKAIKWALL LVFVVCASLY FAFRASLPEL SGNTIAPGLE QAVDIERDTL GTAIIRAQSR
RDAAFGLGYA HGQDRFFQMD LLRRNSAGEL AELFGDGALT LDERHRFHQF RKRARALLSR
LPAKDRAVLE AYSLGVNQAL SQQTLPSFEY LLSGGEITPW QPEDSLLTIF SMYLDLQGNT
VERELVLERI KQLYGNEMLA FVSQNDPIQA ALDGSTLPTQ AMVAPTLSAT ALDRAQQSPI
GSELDAFVKG SNNWAVTGQL TQSGHAMLSD DMHLGLAVPI IWYRAQLNYR HQGGETGERD
IQVTGVSLPG APVIVVGTNG RIAWGFTNGY IDTADWIELD GNEETEIVTE QLKSKGTGKE
MALKLSRFGP VKRLGDKDYA LSWVAHGDFA INLNLMHLET ATHVDEGLKL TRHTGIPVQN
MLIVDEAGNA AWRLTGAISA RDNPTQTAQS ADGWQADRWA VPAEDVPVVS NPANQRLWSA
NSRVLSVSDT QRFGDGGYAI ASRAAQIRDT LQTKDSFDER DFLAMQLDNR ALFLAPWHQL
LTDTLEKQQD EFADDLKALA SWGGCACSDS VGYPLVNSFR IRVMDSLFAP LQTRLAEEGL
SLSKIKGNLE VSVWQLLRQQ PESWLPEKMA DWDSYLLQIY RHNRAELLSR HSQAGKLADL
NWGKVNALKI QHPFSKQIPL LAPLLDMPQV PGFGGHFEPA VQSSGFGASQ RLIVQPGRES
NGILMVPGGQ SGHPLSPYYR SGFDDYANHR PTPLLPGEVK HMLRLSPQ
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