Gene Sama_3489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3489 
Symbol 
ID4605736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4120715 
End bp4121257 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content56% 
IMG OID639782910 
Producthypothetical protein 
Protein accessionYP_929361 
Protein GI119776621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.204932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCC AAAAATTCAG TGCGCGCCCC CTGCTTATGC TGTTGCTGGC ATTCATACTG 
CCAGTGGCGC TGGCAAAGCT GGTGCTCAGC CAACACTGGT ACAACGAAGG GGTAACCAAT
CAGGGGCAAC TCTTCAGCGA GGAAACCAGT TACCAAAGCC TTGGCGCCAC CAACCCGGCA
CCACAACGCT GGCAAATTCT TTATCTGATG CCTCAAACCT GCGATCAGAT GTGCAAAGAC
AGGCTCTATG TCATTCATCA AAGCCACACC GCGCTTGGCG CTGAGCGAAG CAGGGTTACC
CCTCTGGTGC TGGTGTCTGA CACGAGCGAC ATCAAAGCCC TCGACGGCTC CGACTTGCCC
ACTGCCTCAA TGCCACAGGC ACTGGACCCC TTGCTGGCCT CACAGGAGTT TATCCTGGTC
GACCCCATGG GCACTCTGGT GATGCGCTAT CCCTCGGTCA GAGGGCAAGA AGCCAATATC
TCCCAAGGCA AGGCCATGTT GGCCGACCTG CGTAAACTGC TTAAATTATC GAGGGTTGGC
TGA
 
Protein sequence
MNSQKFSARP LLMLLLAFIL PVALAKLVLS QHWYNEGVTN QGQLFSEETS YQSLGATNPA 
PQRWQILYLM PQTCDQMCKD RLYVIHQSHT ALGAERSRVT PLVLVSDTSD IKALDGSDLP
TASMPQALDP LLASQEFILV DPMGTLVMRY PSVRGQEANI SQGKAMLADL RKLLKLSRVG