Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3489 |
Symbol | |
ID | 4605736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 4120715 |
End bp | 4121257 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639782910 |
Product | hypothetical protein |
Protein accession | YP_929361 |
Protein GI | 119776621 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.204932 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCCC AAAAATTCAG TGCGCGCCCC CTGCTTATGC TGTTGCTGGC ATTCATACTG CCAGTGGCGC TGGCAAAGCT GGTGCTCAGC CAACACTGGT ACAACGAAGG GGTAACCAAT CAGGGGCAAC TCTTCAGCGA GGAAACCAGT TACCAAAGCC TTGGCGCCAC CAACCCGGCA CCACAACGCT GGCAAATTCT TTATCTGATG CCTCAAACCT GCGATCAGAT GTGCAAAGAC AGGCTCTATG TCATTCATCA AAGCCACACC GCGCTTGGCG CTGAGCGAAG CAGGGTTACC CCTCTGGTGC TGGTGTCTGA CACGAGCGAC ATCAAAGCCC TCGACGGCTC CGACTTGCCC ACTGCCTCAA TGCCACAGGC ACTGGACCCC TTGCTGGCCT CACAGGAGTT TATCCTGGTC GACCCCATGG GCACTCTGGT GATGCGCTAT CCCTCGGTCA GAGGGCAAGA AGCCAATATC TCCCAAGGCA AGGCCATGTT GGCCGACCTG CGTAAACTGC TTAAATTATC GAGGGTTGGC TGA
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Protein sequence | MNSQKFSARP LLMLLLAFIL PVALAKLVLS QHWYNEGVTN QGQLFSEETS YQSLGATNPA PQRWQILYLM PQTCDQMCKD RLYVIHQSHT ALGAERSRVT PLVLVSDTSD IKALDGSDLP TASMPQALDP LLASQEFILV DPMGTLVMRY PSVRGQEANI SQGKAMLADL RKLLKLSRVG
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