| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3417 |
|---|
| Symbol | |
|---|
| ID | 4605664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 4046290 |
|---|
| End bp | 4047405 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639782837 |
|---|
| Product | kynureninase |
|---|
| Protein accession | YP_929289 |
|---|
| Protein GI | 119776549 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.746937 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACC ATAAATCAGC ATTTTTTCTA CCCGATGGCA CCTATCTGCT GAGCCACTCG
GTTGGCAGAC CGCTCAAATC TGCCAAGGAA GGATTCGAGC AGGATTATTG GCAGCCATGG
TGTCAATCGG GGCGAGAGCC CTGGGGTGAC TGGTTGTCTG GCGTTGAAGC GTTTCGCACG
GCGTTGGGAC AACTCTTTGA TGGTAACGCC AGGGATTTTT GTCCACAGGT GAATTTGTCG
TCGGCACTGA CCAAGTTGGT GTTATCGCAT CCAAGGCTTA ACGTGCCGGG CGCGCGCGTT
CTGATGTGCG AGGAAGACTT CCCGTCCATG GGGTTTGCGC TGCAGCGGGC CTTGCCCCAT
GCCCGTCTGG AATTCATTCC AGCGGGTATC GATATTACAG ATGCCAATGC CTGGGAGGCG
TATTTAACCC CGGGACTGGA TCTGGTGTTT ATCAGCCATG CGTATTCCAA CCTTGGAGCC
TTGTCACCAG TGGAAGCGCT GGTTCCGCGT TGTCGTGAGC TGGGGAGCTT GACTCTGGTG
GATGTGGCCC AGTCGGCGGG GGCCGTGCCC TTATCACTGG CTCAGCTGGC ACCTGACTTT
CTGATTGGCT CGGCGGTGAA GTGGCTCTGC TCCGGGCCGG GCGCTGCCTA CCTGTGGGTG
AATCCCGAAA GGCTTGCGGA ATGCGAGCCT GTGGATGTGG GTTGGTTTTC CCATGAAAAC
CCCTTTGAGT TCAATATTCA CGACTTTCGC TACCATCCGT CGGCGCTGCG ATTTTGGGGT
GGGACCCCCT CTGTGGCGCC TTATGTGATT GGCGCACACA GCATTGGCTG GTTTGCGACC
CTGGGTGCCG ACAAGGTGAG AGCGCATAAT CAGGCTTTGG TTTCAATGCT TTATAATGAG
CTGCACCAGT ATGGTGCAGG CCCTTTGCAG GCACAAAGCC GCAGCGGTAC TGCCATTTTG
CAATTCGGAG ACAGCACTGC AGCGGTGATG GCCGCCCTCA ATGATGCCGG TATCAGCGTC
GACAATCGTC GCTACGGTAT GCGCGTATCA CCGCATCTCT ATAACGATGA GGCCGATATA
CAGCGTTTTA TTGAGTGCGT ACGAGGCGCA CTGTAA
|
|---|
| Protein sequence | MSDHKSAFFL PDGTYLLSHS VGRPLKSAKE GFEQDYWQPW CQSGREPWGD WLSGVEAFRT
ALGQLFDGNA RDFCPQVNLS SALTKLVLSH PRLNVPGARV LMCEEDFPSM GFALQRALPH
ARLEFIPAGI DITDANAWEA YLTPGLDLVF ISHAYSNLGA LSPVEALVPR CRELGSLTLV
DVAQSAGAVP LSLAQLAPDF LIGSAVKWLC SGPGAAYLWV NPERLAECEP VDVGWFSHEN
PFEFNIHDFR YHPSALRFWG GTPSVAPYVI GAHSIGWFAT LGADKVRAHN QALVSMLYNE
LHQYGAGPLQ AQSRSGTAIL QFGDSTAAVM AALNDAGISV DNRRYGMRVS PHLYNDEADI
QRFIECVRGA L
|
|---|
| |