Gene Sama_3395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3395 
Symbol 
ID4605642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4023059 
End bp4023799 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content51% 
IMG OID639782815 
Producthypothetical protein 
Protein accessionYP_929267 
Protein GI119776527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA TTGCACTGAT GTTATTACTC AGCATGGCTT GGTTACCGCA GGCCATGGCG 
GCCAAGGAAT ACACCAAGGC GGAATACATC GAGATCTTCA AAGGAAATAA TGAGGTAGCC
CAGCACAGAG CCATCGAGAC TCTGGTGCTC ACAGGCCTCA GCGATCCCGA GATTTTTGAC
CAAGTCGAGC AGCGACTCAT TGAAAGCCTG CCCTATGCCA CCGACAGGGA TGGTGTGGAT
GAAAGCGCCT GGCTGATGAA AGCCCTCAGT TACTCAGGCA ATCCCAAGTA CGCTGCAACC
CTTAAGAATA TTGAGCAAGG TGACCATCAC CGCAAAGTGC GTGGCTATGC CAAAAAGTCA
CTGGAGGAGT TACAGCGGTT TGAAATCTGG AATCCTGTGA TCACCAACGC TGCCACCTTC
ACCGAAGGAC AGAGCCAACG CACCAATATG CTGGCCAATG GCCTCAAGAG TGACGATTTA
GGGCTAATGG CCAGATCGGT GCGTTACATG GCCAATCAGC GCAATTCCGA GCCATTTTTG
ATGGACATTA TTGCCGCAGA ACTGGAAACC CCACGCCTGC TGACTCAGGA CAATGAATCC
CAGGATGTAT ACGCCTGGTA TGCCAAGGTG CTGGCGAGCA GTGGTGACGA AAAATACAAA
CCCCTGCTGC AAAAGCTGAC CCTCAGCCCT TTCAAAAAAG TCGCCAAGCA CACCAAAAAA
GCGCTGGCAC AATATTACTG A
 
Protein sequence
MKKIALMLLL SMAWLPQAMA AKEYTKAEYI EIFKGNNEVA QHRAIETLVL TGLSDPEIFD 
QVEQRLIESL PYATDRDGVD ESAWLMKALS YSGNPKYAAT LKNIEQGDHH RKVRGYAKKS
LEELQRFEIW NPVITNAATF TEGQSQRTNM LANGLKSDDL GLMARSVRYM ANQRNSEPFL
MDIIAAELET PRLLTQDNES QDVYAWYAKV LASSGDEKYK PLLQKLTLSP FKKVAKHTKK
ALAQYY