| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3372 |
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| Symbol | |
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| ID | 4605619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3998199 |
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| End bp | 3998792 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639782792 |
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| Product | type IV pilus biogenesis protein PilN |
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| Protein accession | YP_929244 |
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| Protein GI | 119776504 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0746534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAACA TAAATCTGTT GCCCTGGCGT GAAGAGGCCA GAGAAAAACA AAAACGTGAT
TATATTGGCG CACTGGCACT GGTATTCCTG TTGTCGGCTT TCTTGGTATT TGCTTGTTTA
CAGGTCATCG ACATGATGAC TGATGAGCAG AAAGCGAGAA ACGCGTTTCT GACTACTGAA
ATTCAGCTGC TCGAAAAGCA AATCGCCGAG ATTAAAAAGA TTACTGAACG CAAAAAAGAT
ATCGAGCGTC GCACAGATAT TATTTTGAAT CTGCAGCAGG CAAGAAATCT TCCCACTCAC
GTACTCGATG AGCTGGTGCG TGTTGTGCCG CCCGGCATCT ATCTTTCAAG TATTGAAAAG
AAAGGCGCCA TGGTATGGAT TGAGGGACGT AGCGAATCCA ATAACAACGT TGCCAACATG
ATGCGTAAAA TGAAGACCTC TGCTTGGCTC GATGACCCAG TGATGCAAAG CATTGTGTCT
CAGAACGACG AGCTTAGAAA ACTGCAGCGC TTCAGTCTTA AGGTAACCGT CGTTGATAAA
GCCGCCCAAG AGCTGGAAAA AGCGGCCGCC AGTAAACAAG GAGCGGCAAA ATGA
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| Protein sequence | MANINLLPWR EEAREKQKRD YIGALALVFL LSAFLVFACL QVIDMMTDEQ KARNAFLTTE
IQLLEKQIAE IKKITERKKD IERRTDIILN LQQARNLPTH VLDELVRVVP PGIYLSSIEK
KGAMVWIEGR SESNNNVANM MRKMKTSAWL DDPVMQSIVS QNDELRKLQR FSLKVTVVDK
AAQELEKAAA SKQGAAK
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