| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3354 |
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| Symbol | |
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| ID | 4605601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3982242 |
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| End bp | 3984029 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782774 |
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| Product | putative lipoprotein |
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| Protein accession | YP_929226 |
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| Protein GI | 119776486 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3107] Putative lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTCTGT CGTTATTGGC AGGTTGCGCA GGCACTCCAG GGACAGATGT CAGCCAGCCA
CAGGGACCCG TTTCTTTGGT AAAGGCCGAG CTGTCTTCCA GCCAATATCT GGCGCTGGCC
GATTCGGCCA AAGATGCCGC CTCCCGCAGC CGCTACCAGT TACTGGCCGC CCACGCCCTG
TTGAATGAAT CCAATCCCCA GGGCGCGGCC CAACTGCTCG GCGCCATCAG AGGCAATCTG
GCGCAGGACA CGGAAATCCA GGCCGAATTC AAATACCTCA CCGCCCGGAC ACTGGAACAA
TCCGGTGATA CTGCGGCGGC GCTGAAAACC CTGGTTTATC CCAGCCATTG GAAGCTGCCG
GATTGGCAGT GGGTGTCCTA TCATCAGCTG CGGGCACAGC TTTTCCGCCT TAAAAAGCAG
CCCATGGACG AGGTGCGAGA ACTGGCCGAG CTGGGCAAGT ATCTCAATGC CACCGAAGCG
GCCGAAGTGA ATGATCGCCT GTGGGGCATT CTGGCGCCCA TGCATGAAGA GACCATTGAA
ACCTTTATGC AAGAAGCCAC ATCGCCAATG TACAAGGGTT GGCTGCAGTT GGCCTTTATC
GCCAAACACT ATGCCGTTGA CCCGCAAACT CTGGTACGTT TCCTGGGTGA CTGGCAGCGG
GAAAACCCAT TCCATCCAGC CGCTAACCGT TTACCGTCAG ATTTGGACCG CGCCCTCAAC
GCCAAGCCTT ATCAGGCGCG CCACATCGCC GTGCTCTTGC CCCTTTCCGG CAGCGCGGCC
TCTGCCGGCT ACGCCATCAA GCAAGGCATA CTGGCGGGTT ATCTGGCGGC AGATGACAGC
AACACCAAGG TGAGTTTTTA CGACAGTGGC GCCAATGCCG TTGCGGCTTA TCAGCAGGCG
CTTGCTGAAG GGGCCGAATT TATTATTGGC CCGCTGCTGC AAAGCAGCAT CGAAGCCATC
GAAGCCTTGC CAAAAGCACA AGGACCCTCG GTGCCTCAGT TGTATCTCAA TCAAATTGGC
ACTTATCAGG CCAATGTCGA TAAGTTTTAC TTTTCCCTGT CGCCGTCGGA AGAGGCCAGC
GATGCAGCCG AACGCCTGTA TCGTGATGGC GTAGAAAAGC CGCTGCTACT CGCCAGCGCC
GACGCCACCG GCCGCCGTAT GGCCGAAGCC TTTAACCAAA CCTGGCACAA ACAAACCGGG
GACGTGGCCG AAGTCCACTA TTTCGAGCAA GGTAATGAAA TGAAGCTCAC GGTTCAGCGC
GCCTTGGGCG TGATGGACAG TGAGGCCCGC ATCGCCCGCA TGAAAGAGAT CCTTGGTCGC
AGGCTTGAGG CCGAGTTCCG CTCCCGCGAA GACGTGGATG CCATTTATAT GATTGCCAGC
CCGCAGGAGA TACAGCTGCT CAAACCCTTT ATCGATGTGA GTTTTTCGGT ATTTGCCGAT
CCTGTCCCTA TGTACACCTC AAGCCGCGCC AGACCCCAGG ACAACGCCCG TCAGGTGCCA
CAGGAATTCA ATAATGTCAT GGTAAGTGAC ATTCCCTGGC TGATGCACCT GAGCGGTGAG
TCAAGGGATA TCAATGAGTT ATGGCCAACC TGGAACAACG GGCAGAAACG CCTGTTTATC
ATGGGCTGGG ATGCACTGGA TCTGGTGGGT AAACTGGCGC AAATGCGCGC CTTCCCGGGT
TTCCAGTTCC AGGGACGTGG CGGCGTACTG TCGGTGACCC ACGACGGACT CATCAAGCGT
CAGCTCTCCT GGGGCAAAAT CCAGCGCGGT GTATTGAGGC CTCTGTGA
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| Protein sequence | MFLSLLAGCA GTPGTDVSQP QGPVSLVKAE LSSSQYLALA DSAKDAASRS RYQLLAAHAL
LNESNPQGAA QLLGAIRGNL AQDTEIQAEF KYLTARTLEQ SGDTAAALKT LVYPSHWKLP
DWQWVSYHQL RAQLFRLKKQ PMDEVRELAE LGKYLNATEA AEVNDRLWGI LAPMHEETIE
TFMQEATSPM YKGWLQLAFI AKHYAVDPQT LVRFLGDWQR ENPFHPAANR LPSDLDRALN
AKPYQARHIA VLLPLSGSAA SAGYAIKQGI LAGYLAADDS NTKVSFYDSG ANAVAAYQQA
LAEGAEFIIG PLLQSSIEAI EALPKAQGPS VPQLYLNQIG TYQANVDKFY FSLSPSEEAS
DAAERLYRDG VEKPLLLASA DATGRRMAEA FNQTWHKQTG DVAEVHYFEQ GNEMKLTVQR
ALGVMDSEAR IARMKEILGR RLEAEFRSRE DVDAIYMIAS PQEIQLLKPF IDVSFSVFAD
PVPMYTSSRA RPQDNARQVP QEFNNVMVSD IPWLMHLSGE SRDINELWPT WNNGQKRLFI
MGWDALDLVG KLAQMRAFPG FQFQGRGGVL SVTHDGLIKR QLSWGKIQRG VLRPL
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