Gene Sama_3348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3348 
Symbol 
ID4605595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3974068 
End bp3974559 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content57% 
IMG OID639782768 
Producthypothetical protein 
Protein accessionYP_929220 
Protein GI119776480 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACTTT TGCTGCAGAT ACTGATAATT GGCGTGGGTG CGACCCTGAT GATGGATCTC 
TGGGCAGGGC TCAGACTCAG GCTATTTGGG GTACCTTCGC TGAACTACGC CATGGTTGGC
CGCTGGCTGC TGTGGATACC CAAAGGACGT TTTATTCATC GACCAATAGC AAGCTCTGAG
TCACAACAAG GCGAGGTCCT GGTTGGCTGG CTCGCCCATT ACGCTATCGG TATCACTTTT
GCCGGACTGC TGCTGCCGTT TGCCGGAGCA GAGTGGTTTA CCGAGCCTTC AGCGGGCCCT
GCTGTTGCAC TGGGCCTTGT CACTGTTGCT GCACCTTTCT TTTTGCTGCA ACCAGTGCTG
GGCATGGGGA TGGCGGCGTC ACGCGCCCCC AATCCCTGGG GTACCCGGGC ACACAGCCTG
ATAACTCACG CCGTCTTTGG GCTTGGTCTG TATCTCAGCG CCCTTGTGAG CAAGGGCATG
GGTCTGGTGT AG
 
Protein sequence
MLLLLQILII GVGATLMMDL WAGLRLRLFG VPSLNYAMVG RWLLWIPKGR FIHRPIASSE 
SQQGEVLVGW LAHYAIGITF AGLLLPFAGA EWFTEPSAGP AVALGLVTVA APFFLLQPVL
GMGMAASRAP NPWGTRAHSL ITHAVFGLGL YLSALVSKGM GLV