| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3331 |
|---|
| Symbol | |
|---|
| ID | 4605578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 3958349 |
|---|
| End bp | 3959398 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639782751 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_929203 |
|---|
| Protein GI | 119776463 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAAC AACAACTTGA ATTTACCTAC ATGCGGGCCA TCGCCATTCT GTGGATTGTG
GCCGGGCACA GTATTTACAA CTCGGGCGCC GGTTTTCCTC TACCGCTGGA AAATCTGGTA
CGGGGCGGCA CCGCCTTGTT TGTGTTTATC TCGGGCTACT TTTATCACCG GATTTTCCAC
CCGCGCATGG TGTACAAAGA ATTTATGGTC AGCAAGCTGC GCAACGTGTT GCTGCCATTT
TTATGGGTGT CACTGGTGGG CCTTGTCATG CTCGCAGCCC AGTGGAGCCT GATGTACGGC
AGACCCTTGT CTGAGGTTGC CAAGGGCATC TATTACACGG TGCGCAATGG CTATGTGCTT
TATCCCCATT GGTACATTCC CTTTATTATG GCGGTGTTTG CCATCTCGCC GGTGTTTTCG
GCCTATATCC GCATGAGCGC AGCCGCGCGC TGGACATTGC TGGCGCTGAG CTGTGTGATA
GCTCTGCTGA TCCACCGCCC CATCGGCAAC ATCAACGTGC TGCATTCTGT GGTGTATTTC
ACCCCCTTCT ACCTGATGGG GATTTTGTAT TCGGCCCATG AAGAGTGGCT CAAAGAAAGA
GCTGTGCCGC TGCTGTGGCT GGCGCTGCTG GGCACCCTTG TAAGCCTGTA TATGCAAACC
TATGTCCAGG GCCATGTGGG CAACTATCAT AAAGAGGCCC TCAGTTGGGG CGGGGTAGAC
TGGCAGTTTG TGCAAAAGTT TAGTCTGGTG ATCCTCGCTG TTGGGCTGTG TCTGTGGTTG
TCCCAAAGAT CGCTCTCCGA GCGCACCCAA AAGAGTCTCA ATGCGCTGGC CGAGATGAGT
TTTGCCATTT TCTTTATCCA TCCGCTGTTT TCTATCCTTT TTGGCGTGAT CACAGGATTG
CTGCGGTTCA AGCTGGCCCC CGGCAACATG TGGACCAGTC TGGGCCTGTC GATGGGGATT
TTTGTGTTTT TGCTGGTGGG CAGCGTACTC ACCGCCAGGG CCATCAAGGC AAAACTGGGC
GATCGCTCCC GCAGTTACAT AGGCTGGTAA
|
|---|
| Protein sequence | MRKQQLEFTY MRAIAILWIV AGHSIYNSGA GFPLPLENLV RGGTALFVFI SGYFYHRIFH
PRMVYKEFMV SKLRNVLLPF LWVSLVGLVM LAAQWSLMYG RPLSEVAKGI YYTVRNGYVL
YPHWYIPFIM AVFAISPVFS AYIRMSAAAR WTLLALSCVI ALLIHRPIGN INVLHSVVYF
TPFYLMGILY SAHEEWLKER AVPLLWLALL GTLVSLYMQT YVQGHVGNYH KEALSWGGVD
WQFVQKFSLV ILAVGLCLWL SQRSLSERTQ KSLNALAEMS FAIFFIHPLF SILFGVITGL
LRFKLAPGNM WTSLGLSMGI FVFLLVGSVL TARAIKAKLG DRSRSYIGW
|
|---|
| |