| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3307 |
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| Symbol | |
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| ID | 4605554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3935845 |
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| End bp | 3936990 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782727 |
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| Product | multidrug resistance protein D |
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| Protein accession | YP_929179 |
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| Protein GI | 119776439 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.635246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.942777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTA AACCTTCTTT GTGGCTGATG CTGCTGTTAT TGATGTTTCC ACAAATAGTA
GAAACCCTTT ACAGCCCGGC ATTGGTGTCG ATTTCGCAGG CGTTTGCTGT CTCTGATACC
GAGGCATCAC AGACTCTGTC GATTTACTTT ATTGCCTTTG CCCTCGGGGT CGCGGTATGG
GGCATAGTGG CCGATGCCTG GGGCCGACGG CCGACCATGT TGTTGGGGCT GAGTGTCTAT
GGCATCTCGG CGTTGGTTGC ATTGCAAACC GACAGTTTCG CCGTGCTCAT GCTGGCCAGA
GCCTGCAGCG CCTTTGGGAT TGCCGTTGGC TCCATTGTGA CCCAAACCAT GCTGCGGGAC
AGCTTTGATG GGGATGCGCT GGGCAAGGTA TTCAGCCTGA TGGGGCTCGG CATCGCCCTG
AGTCCCGTCA TAGGTATGTT TACCGGCGGC CAATTGGTGC TGCTCGGTGG CCATGGCGCG
GTGTTTACGT TGCTGTTATT CATGGCACTG GTACTGCTTG GCTGCTGTGT GCGTTTTTTA
CCGGAGACGT TTCCCGAAAC TGTTACCCGG ACTCAGGGCA CGAATCAGTC GTTTCCGTTA
TCGGCGCTGG CAAAGCGAAT GTTGGCAGAT TGGCACATCT GGCGCTCGGC GCTGCTGGTC
GCCATCTATA ACATCGGCTT GTTCAGCTAT TACCAATTGG GCGGATTTGC CTTTGCCCGG
TTGGGGTTGA CCCCGGAGGT GTTCGGTTAC AGCGGCCTGC TGCTGGGGCT GGGTTCCTGC
GTCGGCAGTT ATCTCAATAG CAGGCTGATT GCCAATGAGG TCAGTCTACA GCGACGGCTT
CTCGGGGCGG CAACCCTGCT GCTGTTGGGC GCTGTTTCCC TGTGCCTGCT GCAGGGCAGT
GTCTGGTTTG TGCTGCCTAT GTGCCTGGTG GTGATGGCAT TCGGGGTGGC TATCCCCAAT
GTGCTGAGTA TGGCCCTGAG TGACTATAAG ATGTATGCAG GCAGTGCCGG TGCCCTGCTT
GGCCTGATGT ACTACCTGCT TATCGGCGCT GGCCTGGCAC TGGCCGGGTT AATAGAGCAC
CTTGGCTGGG TGCTGCTTGG CTGCGCCGTC GCGGCCTGGG CCGTTACGCT TATCCACCGC
CGCTAA
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| Protein sequence | MKTKPSLWLM LLLLMFPQIV ETLYSPALVS ISQAFAVSDT EASQTLSIYF IAFALGVAVW
GIVADAWGRR PTMLLGLSVY GISALVALQT DSFAVLMLAR ACSAFGIAVG SIVTQTMLRD
SFDGDALGKV FSLMGLGIAL SPVIGMFTGG QLVLLGGHGA VFTLLLFMAL VLLGCCVRFL
PETFPETVTR TQGTNQSFPL SALAKRMLAD WHIWRSALLV AIYNIGLFSY YQLGGFAFAR
LGLTPEVFGY SGLLLGLGSC VGSYLNSRLI ANEVSLQRRL LGAATLLLLG AVSLCLLQGS
VWFVLPMCLV VMAFGVAIPN VLSMALSDYK MYAGSAGALL GLMYYLLIGA GLALAGLIEH
LGWVLLGCAV AAWAVTLIHR R
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