| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3304 |
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| Symbol | |
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| ID | 4605551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3929960 |
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| End bp | 3931360 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639782724 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_929176 |
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| Protein GI | 119776436 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.232472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACACT CAGCCTCTAC GCCCAAGCCA GTGCCTGCAG CCGCACCGGC CCACAAGCAG
GCGGCGGCCT TTATCGATCG CCTATCCCTG AAAACACGCC TCTTCGTCAG TGCCGCCATA
CTGGTGGCAT TGCTGCTGCC CGCCCTTGGC ATTGCCCTGT TTCAGGCGTT TGAACGTCAG
GCACTGGCAG GCAGCCGTGA CGAGCTCGGC GCCCTGATTT ACTCGGTGCT GGCACAAACC
GACGTGATAG ACGGCAAGCT GGAAATGCCG CCCTTCCTCA ATGAACCCCA GTTCAATGTC
GATGGCTCCG GCCTCTATGC CGAGGTGCGC TCAGGCGCAG GCGAAGTGCT GTGGCGCTCA
GGCTCCCTCA TTGGCCATGG CGCCATCCCG GCACTGCCAA GCCCCGCCCC CGGCGCCGAT
GCCAAGGTGT TTGGCGAAAC CCTGCTTAAC GACGAGCCGC TGTTTGTGAT GAGCTTTACC
GCCGTCTACG AGAGCAAGGG CGTGGACGTG CCCCTGAGTA TCCATATTCT TAAATCCCAG
CAGCGTTACC GCGAAGCCCT CACCGAATTT GAGTCCAGCC TGTGGCGTTA TCTGCTGCTG
GCACTGGCGC TGCTCGCCGT GGTGCTGGGC CTGTGGCTGC GCTGGACTCT AAAGCCGCTG
TCACGCTTCG AGGCGGAACT CAAAGCGGTG GAGCACGGCG ACAAAGAACG CATAGACACC
GATTATCCCA CCGAGCTTGG GCCGCTGGTG CATCAGCTCA ACTCCCTGTT AACCACAGAG
CAAAACCAGC GTAAACGCTA CCGCAATGCC CTGTCGGATC TGGCCCACAG CTTAAAAACC
CCGCTGGCGG TGCTGCAAAG CCACCCGGGG CTGGACGATG CCGTGATGGA GCAGGTGGAC
AACATCAGCC ACAGCATCAG CCATCAGCTT AAACGGGCCC AGAGCGCCGG CGCCGCCTCC
TGGCACCAGG GGGTGGAAAT CCTGCCCCAG GCAGAGCGGT TAACGCGCAC CTTAAGCAAA
ATCCATGGCG ATAAGGGCAT CGACTTCGAG CTTAAACTCG CGGCCGAACT GGTGTTTAAG
GGCGATAAAG GGGATTTGAC TGAGCTTCTG GGCAATCTTT TGGATAACGC CTGCAAGGCC
GCCCGCTCTC GGGTGTGCTT AAGCGCCGCC AAGCAGGATG GCAGGCTGCG GCTTATCGTC
GAGGATGATG GCCCCGGGGT GGATGAGTCG ATGCGGGATA AGATTTTTGA GCGCGGCATT
CGTGCCGATA CCTACGACAA AGGCCATGGG ATAGGCCTTG CGATAGTGCA GGATCTTACC
GATGCCTATC AGGGACGCTT GCTGCTTGGC CGCAGTGATT TGCTCGGCGG CGCGCGGTTT
GAGGTGTCTT TCCCCCAGTA A
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| Protein sequence | MSHSASTPKP VPAAAPAHKQ AAAFIDRLSL KTRLFVSAAI LVALLLPALG IALFQAFERQ
ALAGSRDELG ALIYSVLAQT DVIDGKLEMP PFLNEPQFNV DGSGLYAEVR SGAGEVLWRS
GSLIGHGAIP ALPSPAPGAD AKVFGETLLN DEPLFVMSFT AVYESKGVDV PLSIHILKSQ
QRYREALTEF ESSLWRYLLL ALALLAVVLG LWLRWTLKPL SRFEAELKAV EHGDKERIDT
DYPTELGPLV HQLNSLLTTE QNQRKRYRNA LSDLAHSLKT PLAVLQSHPG LDDAVMEQVD
NISHSISHQL KRAQSAGAAS WHQGVEILPQ AERLTRTLSK IHGDKGIDFE LKLAAELVFK
GDKGDLTELL GNLLDNACKA ARSRVCLSAA KQDGRLRLIV EDDGPGVDES MRDKIFERGI
RADTYDKGHG IGLAIVQDLT DAYQGRLLLG RSDLLGGARF EVSFPQ
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