| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3299 |
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| Symbol | |
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| ID | 4605546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3925499 |
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| End bp | 3926584 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782719 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_929171 |
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| Protein GI | 119776431 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.216025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATAA AGTACAATTT AAAACCCGCA TCGGAGCGCC GCACTGAGCC CTTTGAACCT
CAGGGAGACG TGGGATTCGG CAAGCTTAGA ACCGACCATA TGTTTATGAT GGACTACAAG
GATGGCCAGT GGCAGAACGC CCGTATTTTG CCCTACGGCC CCTTCGAAAT GATGCCCGGC
GCCATGGCGC TGCATTATGG CCAGTCTATC TTTGAAGGCG CCAAAGCCTT TATGCATGAC
GACGGTGAAA TTTACACCTT CCGTCTGGAC AAAAACGCCC AGCGTCTCAA TCGCTCGGCC
GACATTGTCT GTATCCCGAA TATTCCGGAA GCCGTGCAAC TTGAGGCCAT CAACGCCCTG
ATTGATGTGG ACCGTCTGTG GTTTCCACGT CAGGAAGGCG CCTGTCTTTA TATCCGCCCC
TTTGTATTTG CCACTGAAGA CCGCCTGTCG GTGAGCCCGG CGAACCAGTA CACCTTCTGT
GTGGTATTGA GCCCAAGCGG TGCCTACTAT GGCAAAAACC TCAATGCCAT TCGCCTGTTG
ATCACCACTC AGTTCCACCG GGCTGTGTCC GGTGGCACAG GGGCTTCCAA GGCCGCCGGT
AACTATGCCG CATCCTTGCG TGCCGGTAAG GCTGCCGCCG AGCATGGCGC AGCCCAGGTG
CTGTATCTGG ACTCAACCAA CCAGTACATT GAAGAAGTGG GCGCCATGAA CCACTTCCAT
ATCCGTAAAG ACGGCACCCT GATTATTCCT GAGTTTACCG ATACCATTTT GCGCTCCATT
ACCTCTGAGT CGATTCTGGC GCTGGGTGAA GAGCTCGGCT GCGAAGTGCG TCAGGAGACA
GTAAAACTCA GCGATTTTAT TGCCGATATC GAAGCCGGTG AAATCGTAGA GGCCGGTGGT
TTTGGTACTG CCGCTGTGGT ATCGCCGGTT GGCTCTTACA TCTTTGAAGA TGGCCGTATC
GTCACCGTGG GTGATGGCAA GGTGGGTGAG CGCATCAGCC ACATCTACAA GGTGTATACC
GAGATGCAAA AGGGCCTGCG CCCTGCGCCT GAAGGCTGGG TACGCAAGGT CGAGCGCCGC
AGTTAA
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| Protein sequence | MDIKYNLKPA SERRTEPFEP QGDVGFGKLR TDHMFMMDYK DGQWQNARIL PYGPFEMMPG
AMALHYGQSI FEGAKAFMHD DGEIYTFRLD KNAQRLNRSA DIVCIPNIPE AVQLEAINAL
IDVDRLWFPR QEGACLYIRP FVFATEDRLS VSPANQYTFC VVLSPSGAYY GKNLNAIRLL
ITTQFHRAVS GGTGASKAAG NYAASLRAGK AAAEHGAAQV LYLDSTNQYI EEVGAMNHFH
IRKDGTLIIP EFTDTILRSI TSESILALGE ELGCEVRQET VKLSDFIADI EAGEIVEAGG
FGTAAVVSPV GSYIFEDGRI VTVGDGKVGE RISHIYKVYT EMQKGLRPAP EGWVRKVERR
S
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