47 homologs were found in PanDaTox collection
for query gene Sama_3280 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_3280  acetolactate synthase 2 regulatory subunit  100 
 
 
83 aa  169  9e-42  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_4008  acetolactate synthase 2 regulatory subunit  62.35 
 
 
85 aa  103  7e-22  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3933  acetolactate synthase 2 regulatory subunit  62.35 
 
 
85 aa  103  7e-22  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_4127  acetolactate synthase 2 regulatory subunit  62.35 
 
 
85 aa  103  7e-22  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_4030  acetolactate synthase 2 regulatory subunit  62.35 
 
 
85 aa  103  7e-22  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0363  acetolactate synthase 2 regulatory subunit  65.79 
 
 
86 aa  101  3e-21  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3663  acetolactate synthase 2 regulatory subunit  65.79 
 
 
86 aa  101  3e-21  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0357  acetolactate synthase 2 regulatory subunit  65.79 
 
 
86 aa  101  3e-21  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3613  acetolactate synthase 2 regulatory subunit  61.18 
 
 
85 aa  100  7e-21  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4346  acetolactate synthase 2 regulatory subunit  64.47 
 
 
86 aa  99.4  2e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_0423  acetolactate synthase 2 regulatory subunit  61.04 
 
 
85 aa  92.8  1e-18  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0290  acetolactate synthase 2 regulatory subunit  57.3 
 
 
89 aa  92.4  2e-18  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4164  acetolactate synthase small subunit  60.81 
 
 
86 aa  92  3e-18  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0443  amino acid-binding ACT domain-containing protein  57.5 
 
 
84 aa  90.9  5e-18  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.886591 
 
 
-
 
NC_007954  Sden_3413  acetolactate synthase 2 regulatory subunit  59.74 
 
 
93 aa  89.4  1e-17  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0346  amino acid-binding ACT domain-containing protein  52.05 
 
 
88 aa  77.4  0.00000000000006  Shewanella pealeana ATCC 700345  Bacteria  normal  0.550945  n/a   
 
 
-
 
NC_012912  Dd1591_0139  acetolactate synthase 2 regulatory subunit  45.24 
 
 
85 aa  71.2  0.000000000004  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A0483  acetolactate synthase 2 regulatory subunit  46.75 
 
 
85 aa  70.9  0.000000000005  Yersinia pestis Angola  Bacteria  normal  normal  0.242348 
 
 
-
 
NC_010465  YPK_4060  acetolactate synthase 2 regulatory subunit  46.75 
 
 
85 aa  70.9  0.000000000005  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0155  acetolactate synthase 2 regulatory subunit  46.75 
 
 
85 aa  70.9  0.000000000005  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_4759  acetolactate synthase 2 regulatory subunit  44.44 
 
 
85 aa  69.3  0.00000000002  Serratia proteamaculans 568  Bacteria  normal  0.722527  normal 
 
 
-
 
NC_012880  Dd703_3775  acetolactate synthase 2 regulatory subunit  41.67 
 
 
85 aa  68.2  0.00000000004  Dickeya dadantii Ech703  Bacteria  normal  0.783678  n/a   
 
 
-
 
NC_013421  Pecwa_4220  acetolactate synthase 2 regulatory subunit  47.37 
 
 
86 aa  67.4  0.00000000006  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4031  acetolactate synthase 2 regulatory subunit  47.37 
 
 
86 aa  67.8  0.00000000006  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.612763  n/a   
 
 
-
 
NC_011149  SeAg_B4127  acetolactate synthase 2 regulatory subunit  47.44 
 
 
87 aa  67.4  0.00000000007  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A4292  acetolactate synthase 2 regulatory subunit  47.44 
 
 
87 aa  67.4  0.00000000007  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A4112  acetolactate synthase 2 regulatory subunit  47.44 
 
 
87 aa  67.4  0.00000000007  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4233  acetolactate synthase 2 regulatory subunit  47.44 
 
 
87 aa  67.4  0.00000000007  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.594626  normal 
 
 
-
 
NC_011080  SNSL254_A4184  acetolactate synthase 2 regulatory subunit  47.44 
 
 
87 aa  67.4  0.00000000007  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_4014  acetolactate synthase 2 regulatory subunit  48.24 
 
 
87 aa  64.7  0.0000000004  Enterobacter sp. 638  Bacteria  normal  normal  0.0124044 
 
 
-
 
NC_011353  ECH74115_5203  acetolactate synthase 2 regulatory subunit  44.74 
 
 
87 aa  63.9  0.0000000008  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_03596  hypothetical protein  44.74 
 
 
87 aa  63.9  0.0000000008  Escherichia coli BL21  Bacteria  normal  0.0138992  n/a   
 
 
-
 
CP001637  EcDH1_4207  acetolactate synthase 2 regulatory subunit  44.74 
 
 
87 aa  63.9  0.0000000008  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E4151  acetolactate synthase 2 regulatory subunit  44.74 
 
 
87 aa  63.9  0.0000000008  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4135  acetolactate synthase 2 regulatory subunit  44.74 
 
 
87 aa  63.9  0.0000000008  Escherichia coli SMS-3-5  Bacteria  normal  0.683239  normal 
 
 
-
 
NC_010468  EcolC_4233  acetolactate synthase 2 regulatory subunit  44.74 
 
 
87 aa  63.9  0.0000000008  Escherichia coli ATCC 8739  Bacteria  normal  0.196128  normal  0.522631 
 
 
-
 
NC_009801  EcE24377A_4280  acetolactate synthase 2 regulatory subunit  44.74 
 
 
87 aa  63.9  0.0000000008  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3986  acetolactate synthase 2 regulatory subunit  44.74 
 
 
87 aa  63.9  0.0000000008  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03647  acetolactate synthase II, small subunit  44.74 
 
 
87 aa  63.9  0.0000000008  Escherichia coli BL21(DE3)  Bacteria  normal  0.0123279  n/a   
 
 
-
 
NC_008309  HS_0148  acetolactate synthase 2 regulatory subunit  48.48 
 
 
72 aa  60.8  0.000000006  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0347  amino acid-binding ACT domain-containing protein  39.73 
 
 
85 aa  58.2  0.00000004  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I0054  acetolactate synthase 2 regulatory subunit  40 
 
 
82 aa  55.1  0.0000003  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4844  acetolactate synthase 2 regulatory subunit  42.03 
 
 
89 aa  55.1  0.0000003  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002040  acetolactate synthase small subunit  38.89 
 
 
94 aa  51.2  0.000005  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00411  acetolactate synthase 2 regulatory subunit  37.5 
 
 
94 aa  50.4  0.000008  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_2115  hypothetical protein  34.57 
 
 
92 aa  50.4  0.000008  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2489  acetolactate synthase 2 regulatory subunit  38.57 
 
 
94 aa  45.4  0.0002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>