Gene Sama_3280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3280 
SymbolilvM 
ID4605527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3896663 
End bp3896914 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content56% 
IMG OID639782700 
Productacetolactate synthase 2 regulatory subunit 
Protein accessionYP_929152 
Protein GI119776412 
COG category[S] Function unknown 
COG ID[COG3978] Acetolactate synthase (isozyme II), small (regulatory) subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCATA ATCTGGAAGT CACCATGGCA CAGCGTCCCG AAGTGGTTGA GCGTGTGCTG 
AGGGTTGTTC GCCACAGGGG ATTTACCCTG ACCAACATGA ATATGCGCCT CACTGATGAA
AGCGTCTATC TGTCACTGTC GGTGTCCAGC GAGCGGGCGA TTGAACTTTT GAGCAACCAG
CTGTGTAAGC TGGTGGATGT GACCGGTTGC CATGTGATGC AGCCAGCCAT GCCGCAGTCG
GCCAGCGCCT GA
 
Protein sequence
MNHNLEVTMA QRPEVVERVL RVVRHRGFTL TNMNMRLTDE SVYLSLSVSS ERAIELLSNQ 
LCKLVDVTGC HVMQPAMPQS ASA