Gene Sama_3235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3235 
Symbol 
ID4605482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3829138 
End bp3829524 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content52% 
IMG OID639782651 
Producthypothetical protein 
Protein accessionYP_929107 
Protein GI119776367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.530266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTC GCATATTATT TATACCCGCA TTACTGCTGG GATTAACCGC CACAGCAGGC 
GCCACCGAAT ACCGCTTTAT CGCCGTCGAC AACAGCCCCG AAACTCAGAT GTGTGTCGCA
GCAGGCAGCA ATAAGGTGAC CAAGCTGCGG ATGCAGTTCA ACGAAGCCAG CGGCAGTCCC
CGCTACCATG CCAACAGCAT TCGCTGCAAC GACAGGAGCA TTGCCCAGTT CGCTCATGCC
TATGGTGCTG ACAAGGCCTA TGACTATTTG GCCTCTCACT CTCGGGATAA AAACCGGGTG
ATAGAAAGCG TGACAATTAA AGATCTGTCA GCTGCCGCAA GCCAAAACAG TGACGAGATT
GTTTATATCC GGGTGTCTTC ACGCTAA
 
Protein sequence
MKARILFIPA LLLGLTATAG ATEYRFIAVD NSPETQMCVA AGSNKVTKLR MQFNEASGSP 
RYHANSIRCN DRSIAQFAHA YGADKAYDYL ASHSRDKNRV IESVTIKDLS AAASQNSDEI
VYIRVSSR