| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3228 |
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| Symbol | |
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| ID | 4605475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3820817 |
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| End bp | 3821971 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782644 |
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| Product | glycerate kinase |
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| Protein accession | YP_929100 |
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| Protein GI | 119776360 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1929] Glycerate kinase |
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| TIGRFAM ID | [TIGR00045] glycerate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0890898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.844973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTG TAATTGCGCC GGATTCATTC AAGGAAAGCC TGAGCGCCAT GGAGGTGGCC
GATGCTATCG AGGCCGGTTT CAAGCGGGTA TTGCCCGATG CCACTTATAT AAAGCTGCCG
ATGGCCGATG GCGGCGAAGG CACAGTGCAA TCTCTGGTGG ATGCCACTGG CGGCACCATA
GTGCCGGTAG AAGTAACAGC GCCGCTGGGC AATAAGGTGG AAGCTTTCTT TGGGCTGCTT
GGCAGTGCAA AGGAAAAGGG CGACAGCTGC GTGCGCGCCG TTATCGAGAT GGCGGCTGCT
TCGGGCTTGC ATTTGGTGGC GCCTGAGCTG CGTAATCCGC TGCTGACCTC AAGCTTTGGC
ACCGGCGAGC TGATATTGGC GGCGCTGGAA CGGGGCGTCA CCCATCTTAT TCTGGGCATT
GGCGGCAGCG CCACCAATGA TGGCGGCGCG GGTATGATAA CGGCCCTTGG CGGCAAGTTG
TTGAAAGCCG ATGGCAGCCC GATTGCCTTG GGTGGCGGTA GCCTGGCAGA ACTCAGTCAT
ATTGATTTAA CCGGCCTCGA CCCTCGTTTG GCCGGGCTGA CCATTGACGT CGCCTGTGAT
GTGAATAACC CGCTGTGCGG CCCCAAGGGC GCTTCGGCGG TGTTTGGCCC GCAAAAAGGT
GCAACTCCGG AGATGGTTAC CCTGCTTGAT GCCAATCTGG CGCGTTATGC CAATTGCATT
GAGAGCACTT TGGGCAAGCC AGTCAAAGAC ATCCCCGGCG CAGGTGCTGC AGGCGGTATG
GGCGCAGCGC TGGTGGGGTT ACTTGGCGCC GAGCTTAAGC CCGGCATCCA GATTGTGATT
GAGGCGCTGA AACTTGCCGA TGCACTGGCC GATGCAGACT TGGTTATCAC AGGCGAGGGC
TGTATTGACA GCCAGACCAT TCATGGCAAA ACCCCCATAG GTGTTGCCAG CTGCGCTAAG
CAGTTTGGCA AGCCGGTGAT TGGCATAGCA GGTTGCCTCA GCGACGATTG CGGCGTGGTG
CACGAGCATG GTTTGGATGC CGTATTTGCC GTGGTTAACC GGGCCATGAC GTTGCCGGAA
GCGCTTGCCA CCGCTGGCAC CAATATTGAG CAAACCGCCC GCAACGTCGC GGCGCTGTAT
TGCTTATCCC GCTAA
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| Protein sequence | MKIVIAPDSF KESLSAMEVA DAIEAGFKRV LPDATYIKLP MADGGEGTVQ SLVDATGGTI
VPVEVTAPLG NKVEAFFGLL GSAKEKGDSC VRAVIEMAAA SGLHLVAPEL RNPLLTSSFG
TGELILAALE RGVTHLILGI GGSATNDGGA GMITALGGKL LKADGSPIAL GGGSLAELSH
IDLTGLDPRL AGLTIDVACD VNNPLCGPKG ASAVFGPQKG ATPEMVTLLD ANLARYANCI
ESTLGKPVKD IPGAGAAGGM GAALVGLLGA ELKPGIQIVI EALKLADALA DADLVITGEG
CIDSQTIHGK TPIGVASCAK QFGKPVIGIA GCLSDDCGVV HEHGLDAVFA VVNRAMTLPE
ALATAGTNIE QTARNVAALY CLSR
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