| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3217 |
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| Symbol | rho |
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| ID | 4605464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3808940 |
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| End bp | 3810202 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782633 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_929089 |
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| Protein GI | 119776349 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTAA ATGAACTGAA AAACATGTCC ATCGCCGACC TGGTGGCCTT GGCGGAGAGC
ATGAATCTCG AAAATATGGC CCGTGCCCGC AAGCAGGACA TCATTTTCTC CATCCTCAAA
GCCCATGCCA AAAGCGGTGA AGACATCTTC GGTGGCGGCG TACTCGAAAT TCTCCAGGAC
GGCTTTGGCT TCCTGCGCAG CGCCGATGGG TCTTACCTTG CAGGTCCGGA CGACATCTAT
GTGTCTCCCA GCCAGGTCAG ACGCTTTAAC CTGCGAACGG GTGATACCAT TGCCGGTAAA
ATCCGCCCGC CCAAAGAAGG TGAGCGCTAC TTTGCCCTGC TGAAAGTCAA CGAAGTTAAC
TTCGATAAGC CCGAAATCTC CCGCAACAAG ATCCTGTTTG AAAACTTAAC GCCCCTGCAC
GCCGAAGAGC GTCTGCGCAT GGAGCGTGGT AATGGTTCTA CCGAAGACAT TACCGCCCGT
ATCCTGGATC TGTGCTCCCC TATCGGTAAA GGTCAGCGTG GTCTGATTGT GGCCCCGCCA
AAAGCCGGTA AAACCATGCT GCTGCAGAAC ATTGCCCAGT CCATCAGCTA CAACAACCCC
GAAGTGGTGT TGATGGTGCT GCTGATTGAC GAGCGTCCTG AAGAAGTGAC CGAAATGCAG
CGTCTGGTGC ACGGCGAAGT CATTGCCTCT ACCTTCGACG AGCCAGCAAG CCGCCATGTG
CAGGTAGCTG AAATGGTGAT CGAAAAGGCC AAGCGTCTGG TTGAACACAA AAAAGACGTG
GTGATCCTGC TCGACTCCAT CACCCGTCTG GCCCGTGCCT ACAACACAGT AGTGCCTTCT
TCAGGCAAGG TACTCACAGG TGGTGTGGAC GCCAACGCCC TGCACCGTCC AAAGCGTTTC
TTCGGTGCTG CCCGTAACAT CGAAAACGGC GGCTCGCTGA CCATCATCGC CACTGCCCTT
ATCGACACCG GCTCCAAGAT GGACGAAGTA ATTTACGAAG AGTTCAAGGG CACAGGTAAC
CAGGAACTGC ACCTGTCTCG CAAGGCCGCC GAAAAGCGCG TGTTCCCAGC GATTGACTTC
AACCGCTCCG GTACCCGTCG CGAAGAAAAG CTAACCACCA GTGATGAGCT GCAAAAAATG
TGGATCCTGC GTAAGATTTT GAACCCAATG GACGAAGTTG CCGCCATGGA GTTCCTCATC
GACAAGCTGG CGATGACCAA GACCAACGAC GAGTTCTTTA CCGCCATGAA GCGCGCCAAA
TAA
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| Protein sequence | MNLNELKNMS IADLVALAES MNLENMARAR KQDIIFSILK AHAKSGEDIF GGGVLEILQD
GFGFLRSADG SYLAGPDDIY VSPSQVRRFN LRTGDTIAGK IRPPKEGERY FALLKVNEVN
FDKPEISRNK ILFENLTPLH AEERLRMERG NGSTEDITAR ILDLCSPIGK GQRGLIVAPP
KAGKTMLLQN IAQSISYNNP EVVLMVLLID ERPEEVTEMQ RLVHGEVIAS TFDEPASRHV
QVAEMVIEKA KRLVEHKKDV VILLDSITRL ARAYNTVVPS SGKVLTGGVD ANALHRPKRF
FGAARNIENG GSLTIIATAL IDTGSKMDEV IYEEFKGTGN QELHLSRKAA EKRVFPAIDF
NRSGTRREEK LTTSDELQKM WILRKILNPM DEVAAMEFLI DKLAMTKTND EFFTAMKRAK
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