Gene Sama_3211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3211 
Symbol 
ID4605458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3800987 
End bp3801997 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content58% 
IMG OID639782627 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_929083 
Protein GI119776343 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATCA TCACCAGTGC CTTCCCACAA CGCAGAATGC GCCGTATGCG CAAACACGAG 
TTCAGCCGTC GCCTGATGGC CGAAAATACC CTGACGGTTA ACGACCTGAT TTATCCCATG
TTTGTGCTCG AAGGTAATCA CCGCACCGAG CAAGTGGCCT CCATGCCCGG CATCGAGCGC
TACAGTATCG ATCTGCTCCT CAAAGAAGCA GAAGAGCTGG TCAAACTGGG GATTCCACTG
ATTGCCCTCT TCCCCGTGAC CCCAGCGGAA AAGAAAACCC TGCTGGCAGA AGAAGCCTAT
AACCCCGATG GTTTGGCGCA GCGCGCCGTG CGTGCCCTCA AGCGTGAGTT TCCCCAGCTG
GGTGTGATGA CCGACGTGGC CCTGGACCCC TTCACCACCC ACGGTCAGGA CGGCATCATC
GATGACACCG GCTATATCGT TAACGACATC ACCACCGACA TTCTGGTGAA GCAGGCTCTG
TCCCATGCCG AGGCCGGTGC CGACATTGTG GCTCCGTCCG ACATGATGGA CGGCCGTATC
GGCGCTATCC GTAACGCGCT GGAAGCCGCT GGCCACGTGA ATACCCAAAT CATGGCCTAC
TCGGCCAAGT ATTCATCCAA CTACTATGGC CCATTCCGTG ACGCCGTCGG CTCTGCCGGC
AACCTCAAGG GTGGCAATAA ACACAGCTAC CAGATGGACC CGGCCAACAG CGATGAGGCC
CTCCATGAAG TGGCACTGGA CATCCAGGAA GGTGCCGACA TGGTGATGGT CAAGCCCGGC
ATGCCCTATC TGGATATAGT GCACAGGGTG AAAACTGAAT TGGCCGTGCC CACCTTTGCC
TATCAGGTCA GTGGGGAGTA CGCCATGCAC ATGGCGGCCA TTCAAAACGG CTGGCTGGCG
GAAAAAGCCA TAGTGATGGA GTCCCTGCTG TGCTTCAAGC GCGCCGGGGC CGACGGCATT
CTCACTTACT TTGCCAAGCG TGCCGCCCAG TGGCTTAACG AGCAGAAGTA A
 
Protein sequence
MNIITSAFPQ RRMRRMRKHE FSRRLMAENT LTVNDLIYPM FVLEGNHRTE QVASMPGIER 
YSIDLLLKEA EELVKLGIPL IALFPVTPAE KKTLLAEEAY NPDGLAQRAV RALKREFPQL
GVMTDVALDP FTTHGQDGII DDTGYIVNDI TTDILVKQAL SHAEAGADIV APSDMMDGRI
GAIRNALEAA GHVNTQIMAY SAKYSSNYYG PFRDAVGSAG NLKGGNKHSY QMDPANSDEA
LHEVALDIQE GADMVMVKPG MPYLDIVHRV KTELAVPTFA YQVSGEYAMH MAAIQNGWLA
EKAIVMESLL CFKRAGADGI LTYFAKRAAQ WLNEQK