| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3096 |
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| Symbol | |
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| ID | 4605343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3669787 |
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| End bp | 3670455 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782512 |
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| Product | OmpA family protein |
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| Protein accession | YP_928968 |
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| Protein GI | 119776228 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.625816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.135451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAGA AAGCAATTCT TACCCTGACT GGCGTATTTG CCCTGGCTGC TATGGGCACT
GGTTGCAGCA CAGTGAACCC CTATACCAAT GAACAGCAAA CTGCCAATGC CACCACTGGC
GCCATCATAG GTGCTGTTGC AGGTGCTGCC GTGGGCGTAG CCTCTTCCAG TAAGAGCGAC
CGCGGTAAAG GTGCGCTGAT TGGCGCTGCA TCGGGAGCGG CAGTCGGTGG CGGTATCGGT
TATTACATGG ATGTGCAGGA AACCAAACTG CGTCAGCAGC TGCAGGCCAG CGGCGTCAGC
GTGACCCGCA ATGGTGACAA CATCATTCTG AATATGCCAA ACGACGTGAC CTTTGCCGTG
GACAAGACTG ATCTGAGCCC ACGCGCCATG CAGGTATTGG ACTCGGTTGC TCTGGTGGCG
AAAGAGTACA GCAAGACCCG TTTGAATGTA CTGGGTTATA CCGATTCAAG TGGCGCAGAC
AGCTACAACC TGCGTCTGTC TCAGGTACGG GCTTCGGAAG TGGGCAATTA CCTGCTGAGC
AAGGGGGTTG CTGCCGCGCG TGTATCCACT CAGGGCATGG GCGAGGCCAG CCCCATCGCG
TCTAACGCCA CCGCAGAGGG CCGTGCCCAA AACCGCCGCG TAGAAATTAT CCTCACGCCT
ATTGGCTAA
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| Protein sequence | MNKKAILTLT GVFALAAMGT GCSTVNPYTN EQQTANATTG AIIGAVAGAA VGVASSSKSD
RGKGALIGAA SGAAVGGGIG YYMDVQETKL RQQLQASGVS VTRNGDNIIL NMPNDVTFAV
DKTDLSPRAM QVLDSVALVA KEYSKTRLNV LGYTDSSGAD SYNLRLSQVR ASEVGNYLLS
KGVAAARVST QGMGEASPIA SNATAEGRAQ NRRVEIILTP IG
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