Gene Sama_3095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3095 
Symbol 
ID4605342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3668794 
End bp3669666 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content58% 
IMG OID639782511 
Productmolybdate ABC transporter periplasmic molybdate-binding protein 
Protein accessionYP_928967 
Protein GI119776227 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0725] ABC-type molybdate transport system, periplasmic component 
TIGRFAM ID[TIGR01256] molybdenum ABC transporter, periplasmic molybdate-binding protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.674583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.14059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGCT ACTGGGGTTT GCTTGAGCGT CTGTTATCAG CTCTGCGAAG GCCACCCTGG 
CCTTCCTCCT CACCTATATC ACGGAAGAAA ATGAAAAAAT CCATACTGCT CATATCCATA
CTGGTTTCCA TCGGCAGTGT CATGGCCGCG GAACCTCTGG AACTTCGTGC CGCCGGCAGC
CTCAAAGCCG CCATGGGCGA CATAGTGCAG GCCTTTGAGA AAGACATGGG GCAGGCTGTT
GTGGCCCAGT TTGGTCCTTC CGGACTGCTT CGGGAGCGTA TCGAGTCCGG TGAAAACGTT
GACCTGTTCG CCTCAGCCAA TATGAAACAC CCGCAAACCC TGCAGGCAAA AGGTATGGGA
GACAAGGTAC AAGCGTTTGC CCGTAACCAG CTTTGTGCGC TGGCGCAGCC CGAGATTGTG
TTGACCCCGG CCACCCTGCT GGAGCGCATG TTGTCAGCGG ACGTGCGTGT GGGGACTTCC
ACGCCCAAGG CAGACCCCTC AGGCGACTAC GCGTTTCGGG TCTTCGAGTT GGCCGAAACG
ATTGAGCCTG GCGCCGAGAC AAGGCTCAAA ACCAAGGCAC TGCAGCTCAC GGGAGGACCA
AACAGCGCCA AACCGCCCAA GGGCGTCAAT CCCTATGCCC ATGTGATGAA GACCCGTCAG
GCGGATATCT TCCTGACCTA CTGCACCAAT GGTCGTCTTG CCCGCAAAGA GTACGCCGAG
CTGCAACTGG TGCATTTACC GGAAAACCTG GCCGTGGGGG CAGATTATGG GCTTTTGGTA
ATAGATGAGC GCGCAAGGCC GCTCGCCGAC TACATTTTGT CACCGGCCGG ACAGGCCATT
CTTGGCGATT ATGGGTTTGC CCCACCACGC TGA
 
Protein sequence
MKRYWGLLER LLSALRRPPW PSSSPISRKK MKKSILLISI LVSIGSVMAA EPLELRAAGS 
LKAAMGDIVQ AFEKDMGQAV VAQFGPSGLL RERIESGENV DLFASANMKH PQTLQAKGMG
DKVQAFARNQ LCALAQPEIV LTPATLLERM LSADVRVGTS TPKADPSGDY AFRVFELAET
IEPGAETRLK TKALQLTGGP NSAKPPKGVN PYAHVMKTRQ ADIFLTYCTN GRLARKEYAE
LQLVHLPENL AVGADYGLLV IDERARPLAD YILSPAGQAI LGDYGFAPPR