| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3010 |
|---|
| Symbol | |
|---|
| ID | 4605257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 3582765 |
|---|
| End bp | 3583784 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639782421 |
|---|
| Product | arginine N-succinyltransferase |
|---|
| Protein accession | YP_928882 |
|---|
| Protein GI | 119776142 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3138] Arginine/ornithine N-succinyltransferase beta subunit |
|---|
| TIGRFAM ID | [TIGR03243] arginine and ornithine succinyltransferase subunits
[TIGR03244] arginine N-succinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATCA TTCGTCCAAT CCGGGCCAGC GATTTTGATG CCCTGTACCG CATTGCGGTG
GAGTCGGGCC ACGGCTTCAC TTCACTGCCG GTTAACGAAG ACTTGTTGCG TCGCAAAATA
GCGCGCTCTG AAGCCTCTTT TCAAAAGGTC GTGGAAACCC CTTACGATGA AGGCTACCTG
ATGGTGCTCG AAGACACACA GACCCAGGAA GTGGTGGGCA CCTGTGCACT CGAGGCCGCC
GTGGGGATGG AAGATGCCTT CTACCATTAT CGTCTCGGCA CCGAGGTATA TCATTCGCAG
CAAATCAATG TGCGCAACGA AGTTGAGACC CTCACCCTCT GTCACGACTA CACAGGCGCC
GCCGAGCTTT GCACCCTGTT TTTGCGTGGG GCGTATCGCA AAGACAACAA TGGTCGCATG
CTCTCCCGCA GCCGTTTTCT GTTTTTGGCC CAGCACGCCA ATCGTTTCGG GGAAACCGTG
ATTGCCGAAA TGCGTGGTGT CAGCGATGAA AACGGCAATT CCCCGTTTTA TGGCTGGCTG
CAAAAGCACT TCCTCGGTAT CGACTTTGTC GAAGCCGACT ATCTCTCTGG TTTGGGACGC
AAAGCCTTTA TGGCCGAGAT GATGCCCAGA AACCCGGTAT ATGTGTGTTT GCTCCCCGAA
GAAGCCCAGA AGGTGATTGG CGAAGTGCAT ACAAACACCC GTCCGGCCTT GAGTTTGCTG
CGGGCCGAAG GTTTCCGCTG CCGCGGATAT GTGGACATAT TCGACGGTGG CCCAACGGTG
GAGTGCAATC TGCAGGATAT CCGCGGCGTG CGCGAAAGCC GCCTGCTGAC GGTTCGCATC
GGTGAGATGC CCGCCTCAGA TGACAGTTTT ATTCTCTCCA ACACCCAGCT TGTGGATTAC
CGTGCAACCT CGGTCGAGCT GATGGTTTCC TCCGATTCAG ATGAAGTGAT ACTCAGCCCT
GAGCTGGCGG CTGGCCTTCT GGTCAGTGAC GGCGAGCAGG TGCGGGTACT GGCAATATAG
|
|---|
| Protein sequence | MLIIRPIRAS DFDALYRIAV ESGHGFTSLP VNEDLLRRKI ARSEASFQKV VETPYDEGYL
MVLEDTQTQE VVGTCALEAA VGMEDAFYHY RLGTEVYHSQ QINVRNEVET LTLCHDYTGA
AELCTLFLRG AYRKDNNGRM LSRSRFLFLA QHANRFGETV IAEMRGVSDE NGNSPFYGWL
QKHFLGIDFV EADYLSGLGR KAFMAEMMPR NPVYVCLLPE EAQKVIGEVH TNTRPALSLL
RAEGFRCRGY VDIFDGGPTV ECNLQDIRGV RESRLLTVRI GEMPASDDSF ILSNTQLVDY
RATSVELMVS SDSDEVILSP ELAAGLLVSD GEQVRVLAI
|
|---|
| |