Gene Sama_2997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2997 
Symbol 
ID4605244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3570577 
End bp3571023 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content54% 
IMG OID639782408 
Producthypothetical protein 
Protein accessionYP_928869 
Protein GI119776129 
COG category[S] Function unknown 
COG ID[COG5589] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02444] conserved hypothetical protein TIGR02444 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATATCTG AGGAAGTATT CACCCGCGAA CTCTGGCAAG CCTGCGAGGC CCATTACAGC 
CTGCATGAAT CGCTTTGCCT GTCGCTGCAG GATGACTGCC AAATCAATGT CAATCTGTTG
TTGCTGGCGA GCGAACTCGA CCGGCGCGGC ACAGGGCTCA ACCAGAGCCA ATGGCAAATG
CTGATTGTCG AAGTCGCTGC CTGGGACGAG CGCCTGATAG GTCCCTATCG TCGCTTGCGG
CAGTTGGCCA AAAACAGCCT GAGCGAAGAC GAATACCGTC AGATGCTGGA TGTGGAGCTG
ATGATGGAGC GCAAGGTACA AAATCTGCTG CTCCATCGTT TAAACCAACT GCCCACCAGC
CAGGGCGAAG CTGATAATCT GATGCTGCTG TTGGCAGAGT TCGGGCTTGA TATTGAGGTA
GCCGCCGCGC TCATCCATCA AGATTAA
 
Protein sequence
MISEEVFTRE LWQACEAHYS LHESLCLSLQ DDCQINVNLL LLASELDRRG TGLNQSQWQM 
LIVEVAAWDE RLIGPYRRLR QLAKNSLSED EYRQMLDVEL MMERKVQNLL LHRLNQLPTS
QGEADNLMLL LAEFGLDIEV AAALIHQD