| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2977 |
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| Symbol | |
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| ID | 4605224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3547369 |
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| End bp | 3547977 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782388 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit E |
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| Protein accession | YP_928849 |
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| Protein GI | 119776109 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE |
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| TIGRFAM ID | [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACACT ACATTAATCT GTTTATCCAG GCGTCATTTA TCGACAACAT GGCGCTGTCT
TTCTTCCTGG GCATGTGTAC CTTCCTCGCG GTGTCGAAGA AGGTGTCTAC CTCACTCGGT
CTCGGCATTG CCGTGATTGT GGTGATGGTG CTGGCGGTGC CGCTCAATCA GCTGATTTAC
GTGGCCGTAC TTAAGCCGGG TGCTCTGGCG TGGGCTGGCT TCCCTGAGCT GGATTTGTCC
TATCTGCAGC TCATCACCTT TATCGGGGTG ATTGCGGCGC TGGTGCAAAT CCTTGAAATG
GTGCTCGACC GCTTTATGCC AGTGCTGTAC CAGACCCTGG GGATCTTCCT GCCACTGCTG
ACGGTTAACT GCGCCATCTT CGCCGGGGTG ATTTTTATGG CCAACCGCGA CTATACCCTG
ACCGAGTCAG CGGTGTTCGC CGCCGGTGCC GGTACCGGCT GGGCAGTGGC CATTGTGCTG
CTCGCCGGTA TTCGCGAGCG CCTCAAGTTC AATGCCATTC CCGAAGGGTT ACAGGGCATT
GGTATCACCT TTATCACCAC AGGGCTGATG GCGCTGGGCT TTATGTCCTT TGCCGGTATC
AGCCTGTAA
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| Protein sequence | MEHYINLFIQ ASFIDNMALS FFLGMCTFLA VSKKVSTSLG LGIAVIVVMV LAVPLNQLIY
VAVLKPGALA WAGFPELDLS YLQLITFIGV IAALVQILEM VLDRFMPVLY QTLGIFLPLL
TVNCAIFAGV IFMANRDYTL TESAVFAAGA GTGWAVAIVL LAGIRERLKF NAIPEGLQGI
GITFITTGLM ALGFMSFAGI SL
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