| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2976 |
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| Symbol | |
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| ID | 4605223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3546138 |
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| End bp | 3547355 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782387 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit F |
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| Protein accession | YP_928848 |
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| Protein GI | 119776108 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATGA CGATTGGAAT GGGTATGTTC ACCGTGGTGG TGTGCATCCT GGTGGCAGTC
ATCCTGATTG CCCGCAGTAA ATTGGTGGCA AGCGGCGATG TGCAGCTTCG CATTAACGAG
GATAAAGATA AAACCGTGGC CGTGCCTGCC GGTGGCAAGC TTTTGGGCGC CCTGGCCGGC
AAAAATATCT TCGTGCCTTC TGCCTGTGGC GGCGGCGGTA CCTGCGGTCA GTGCCGGGTA
AAAGTGAAGT CCGGTGGCGG CGATATTCTG CCCACCGAGC TTGACCATAT CACCAAGAAA
GAGGCCAAAG AGGGTTGCCG TCTGGCCTGT CAGGTGGCGG TGAAATCCGA TATGGATCTT
GAGCTCGATG ACGAGATCTT CGGGGTGAAG AAGTGGGAGT GCGAGGTGAT TTCCAACCGC
TCCACCGCCA CCTACATCAA GGAGCTGCTG CTCAAAGTGC CCGAAGGTGA AGAAGTGCAT
TTCAAGGCCG GTGGTTACAT TCAGATTGAA GCCCCTGCCC ACGAAGTACA CTACAAAGAC
TTTGATATTC CAGAAATCTT CCGCGATGAC TGGGAAAAGT ACGGCCTCTT TAATCTGGTA
TCCAGAGTGG ATAGCGAGGT CATGCGCGCC TACTCCATGG CTAACTATCC GGAAGAGCAG
GGCCGTATCA TGCTGAACGT GCGTATTGCT ACGCCGCCAA GCCCTGAGTT GCCACCGGGA
CAGATGTCTT CTTACATCTT TAACTTAAAG CCCGGCGACA AGGTGATTAT TTCAGGCCCC
TTTGGTGAGT TCTTTGTCAA AGAGACAGAC GCGGAGATGG TGTTTATTGG CGGTGGTGCC
GGTATGGCGC CGATGCGAAG CCATATTTTT GATCAGCTCA AGCGGGTGAA AACCTCGCGC
AAGATGAGCT TCTGGTACGG GGCCCGCTCC CTGCGTGAGG TGTTCTATCA GGAAGATTTC
GATGGCCTTG CCGCCCAAAA CCCCAACTTC GAATGGCATA TTGCGCTCTC TGAGCCACTG
CCGGAAGACA ACTGGACAGG CTACACCGGC TTTATCCATA ACGTGCTGTA CGAGAACTAC
TTAAAGCAGC ATAAGGCGCC GGAAGATTGC GAGTTTTACA TGTGTGGCCC GCCCATCATG
AACAGCTCAG TCATTGCCAT GCTGGAAGGC TTGGGCGTTG AGCGTGACAA CATTCTGCTG
GATGACTTTG GTGGCTGA
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| Protein sequence | MEMTIGMGMF TVVVCILVAV ILIARSKLVA SGDVQLRINE DKDKTVAVPA GGKLLGALAG
KNIFVPSACG GGGTCGQCRV KVKSGGGDIL PTELDHITKK EAKEGCRLAC QVAVKSDMDL
ELDDEIFGVK KWECEVISNR STATYIKELL LKVPEGEEVH FKAGGYIQIE APAHEVHYKD
FDIPEIFRDD WEKYGLFNLV SRVDSEVMRA YSMANYPEEQ GRIMLNVRIA TPPSPELPPG
QMSSYIFNLK PGDKVIISGP FGEFFVKETD AEMVFIGGGA GMAPMRSHIF DQLKRVKTSR
KMSFWYGARS LREVFYQEDF DGLAAQNPNF EWHIALSEPL PEDNWTGYTG FIHNVLYENY
LKQHKAPEDC EFYMCGPPIM NSSVIAMLEG LGVERDNILL DDFGG
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