| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2926 |
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| Symbol | |
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| ID | 4605173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3480845 |
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| End bp | 3481534 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639782337 |
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| Product | hypothetical protein |
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| Protein accession | YP_928798 |
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| Protein GI | 119776058 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000884331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.288899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCATA CCAGTCTGGC GCTGCTGAGC TTATTGATTA CCCTCATGGG CTATTACGGC
GCCAAGCGTC TGTACAGCTG CTTGGGCTAC TGGTGGGCCG CCCCCATTCT GCTGGCGCCC
TTACTGATTA TTGCCGCTGT CCTGCTGCTG GATATTCCAC TGCCCAGCTA TTTCGAGTAC
ACCCATTTTC TGGTGCTCCT CCTGGGTCCT GCCACCATTG CTTTTGCGCT GCCCATTTAC
CGTGAGCGTG CCCTTATCCG CCGTTACCCC ATTACCCTCA CATTGGGGGT GATGGCCGGT
TTGCTGCTGG GCTTGGTGTC GTCCTGGGGG CTGGTGAAAC TCTTTGCTCT GCCGCCGGAA
ATTGGCCAGA GCGTACTGGT GCGCTCCGTT TCCACCCCCT TTGCCATGGA AGCCACCACG
GCTTTTGGCG GTGTGCCCGA GCTAACGGCC ATGGTGGTGT TGATGACGGG TGTGGTGGGT
ATGCTGCTGT GCGGGCCGCT GTTTCGCTTT GGCAGGGTAC GTTCATCCCT CGCCAGAGGC
GTTGCCCTTG GGGCATCGGC TCACGGTGCC GGCGCCGCCA AGGCGCGTGA GTACGGTGAA
GAAGAGGCTG TGGTGGCCAG CCTGACAATG ATTTTCACCG GTATCGCCAT GGTGCTGGGG
GCCCCCGTGT TTGCCCTGTT TCTCGTATAA
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| Protein sequence | MSHTSLALLS LLITLMGYYG AKRLYSCLGY WWAAPILLAP LLIIAAVLLL DIPLPSYFEY
THFLVLLLGP ATIAFALPIY RERALIRRYP ITLTLGVMAG LLLGLVSSWG LVKLFALPPE
IGQSVLVRSV STPFAMEATT AFGGVPELTA MVVLMTGVVG MLLCGPLFRF GRVRSSLARG
VALGASAHGA GAAKAREYGE EEAVVASLTM IFTGIAMVLG APVFALFLV
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