| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2866 |
|---|
| Symbol | |
|---|
| ID | 4605113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 3405197 |
|---|
| End bp | 3405580 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639782277 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_928738 |
|---|
| Protein GI | 119775998 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3686] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCT TGCTCGTGTG TTTATTGATT TCCATGTTAC TGCCTTACCT GGCCAAGGGG
CCTGTTGCCG TGGCCATGGC CAAAATGGGT GGCTACGACA ACCACCATCC CCGCAGCCAG
CAGGCGAGAC TCGAGGGCTT TGGCGCCAGA GCGCTGGCCG GCCATCAAAA CGCCTTCGAA
TCTTTGTTGA TTTTCGGCCT AGCGGCTCTG GTGGTGATAG CCACAGATAA GGTCAATGGC
ACTGCCGAGG TGGCCGCTGT GGTGCATGTG ATTGCCCGGG TGGGCTATCA TCTCGCGTAT
TTGTACGACA AGGACAAGCT GCGCTCCAGC CTGTGGTTTG TGAGTATGAT TAGCTGCTTC
ACGCTGTTTG CCCAGGCGTT CTGA
|
|---|
| Protein sequence | MTTLLVCLLI SMLLPYLAKG PVAVAMAKMG GYDNHHPRSQ QARLEGFGAR ALAGHQNAFE
SLLIFGLAAL VVIATDKVNG TAEVAAVVHV IARVGYHLAY LYDKDKLRSS LWFVSMISCF
TLFAQAF
|
|---|
| |