Gene Sama_2812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2812 
Symbol 
ID4605059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3350574 
End bp3351191 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content57% 
IMG OID639782223 
Producthypothetical protein 
Protein accessionYP_928684 
Protein GI119775944 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.14111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.621044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACC CGCTCAGTTT GCTGTTTGCC GCGTCACTGT CGGTGTCACC CTGGGTGGCC 
GCCGAAGTGT ATGTTACCCC CTTTGCCGGT TACAGTTTTG CCGCCAGCAG TCTGGATGCC
AACCGTGATG GGCTGGACAC CAATGGCAGC GTCAGTGCCG AAGAGTCCTC CCATTACGGC
ATCATACTGG GCACCACCAC CAATCATCCC GGCAATATGT ACGTGCTTTA CTCGTCCCAG
AGTACCGACC TGATAGCGGG TGGCAACTTT TCAAACGAGC GAGTCACCTC CCTTAAACTC
GACTATGCCC ATGTGGGGGG TAGCCTGTAT TTCCCCCGCG GGGATTTTCT GCCCTATGTC
ACCGCCTCCA TGGGCTTGAC CCAGATGCGG CCGGGGGACG ACTACAGCGA TGAAACCCGC
TTTTCGCTGG GGCTCGGGGT TGGCGCCGAG TATCGCCTTG GTGAGCGACT TGCCTTGGTG
GCCGACATTC GTGCCTTCGC CACGTTTATT GACAGTGAAA ACAGCCTCTT TTGCGATGCC
AATAACTGTT TGTGGCAGGT GAACGCCGAT TTGATGTGGC AGGGGCAGGC CAACGTCGGC
GTCAGTTTCA GGTTCTAA
 
Protein sequence
MKYPLSLLFA ASLSVSPWVA AEVYVTPFAG YSFAASSLDA NRDGLDTNGS VSAEESSHYG 
IILGTTTNHP GNMYVLYSSQ STDLIAGGNF SNERVTSLKL DYAHVGGSLY FPRGDFLPYV
TASMGLTQMR PGDDYSDETR FSLGLGVGAE YRLGERLALV ADIRAFATFI DSENSLFCDA
NNCLWQVNAD LMWQGQANVG VSFRF