Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2812 |
Symbol | |
ID | 4605059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3350574 |
End bp | 3351191 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639782223 |
Product | hypothetical protein |
Protein accession | YP_928684 |
Protein GI | 119775944 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.14111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.621044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATACC CGCTCAGTTT GCTGTTTGCC GCGTCACTGT CGGTGTCACC CTGGGTGGCC GCCGAAGTGT ATGTTACCCC CTTTGCCGGT TACAGTTTTG CCGCCAGCAG TCTGGATGCC AACCGTGATG GGCTGGACAC CAATGGCAGC GTCAGTGCCG AAGAGTCCTC CCATTACGGC ATCATACTGG GCACCACCAC CAATCATCCC GGCAATATGT ACGTGCTTTA CTCGTCCCAG AGTACCGACC TGATAGCGGG TGGCAACTTT TCAAACGAGC GAGTCACCTC CCTTAAACTC GACTATGCCC ATGTGGGGGG TAGCCTGTAT TTCCCCCGCG GGGATTTTCT GCCCTATGTC ACCGCCTCCA TGGGCTTGAC CCAGATGCGG CCGGGGGACG ACTACAGCGA TGAAACCCGC TTTTCGCTGG GGCTCGGGGT TGGCGCCGAG TATCGCCTTG GTGAGCGACT TGCCTTGGTG GCCGACATTC GTGCCTTCGC CACGTTTATT GACAGTGAAA ACAGCCTCTT TTGCGATGCC AATAACTGTT TGTGGCAGGT GAACGCCGAT TTGATGTGGC AGGGGCAGGC CAACGTCGGC GTCAGTTTCA GGTTCTAA
|
Protein sequence | MKYPLSLLFA ASLSVSPWVA AEVYVTPFAG YSFAASSLDA NRDGLDTNGS VSAEESSHYG IILGTTTNHP GNMYVLYSSQ STDLIAGGNF SNERVTSLKL DYAHVGGSLY FPRGDFLPYV TASMGLTQMR PGDDYSDETR FSLGLGVGAE YRLGERLALV ADIRAFATFI DSENSLFCDA NNCLWQVNAD LMWQGQANVG VSFRF
|
| |