| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2715 |
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| Symbol | |
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| ID | 4604962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3247878 |
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| End bp | 3248696 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782126 |
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| Product | putative regulatory protein |
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| Protein accession | YP_928587 |
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| Protein GI | 119775847 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.241271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.389731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACAT TGCCGCATCT TGGTTTTCAG GTTTATCAGC CCTGCGCCCC GCTGCTGCCC
TATGTTCGCT GCTACTGGCA AATCACCCGC ATTGCCGCCC CTGAGACAAG GTCGACCGAA
TTCATGCACC CCGAAGGAGG CACCGGCATC ATCTTCAATT TCGGTGCGCC AATGCACTTC
GATGGCTGGC AACACAGGGC CCAGTGTCTG GTGACAGGCC CCACCAAACA AAGCACCAGG
CTGGAGCTTT CAGGCCGGGT CGATGCGCTC GGCATTCGTT TTTGGCCCGG CGCCGGACGG
GCGTTTTTAA AGACGCCCCT GTCGGAAATG CTCGGTCAAA CCCTGACACC GGCCGACCTG
TCGCTCGCAC TCTTAAGCGA TGAGCTGGCC GAACGTCTGG CCGTGCTGCC CACCGCGCCT
GAGCGCATTG CGCTGCTTGA AACCCGGCTG CTGCACTACC TCACCGCCCA TGGCTCACAA
ACACAGACGA CCGAACCCAG CATGAAATAT GCGCTCAACT GGATAGCCGA GCAAAAAGGT
CAGGGAGAAA TACGTAACCT GCTCACCGAG ATAGACATCA GCCAACGCCA GCTTGAGCGT
TTATTCCAGC AAAACCTGGG GATGTCGCCA AAAAACTACA GCATATTGCA GCGCACCGGC
TTCGCCCGGG AACTGCTTAA AAGCGACACC GACAGCCCTC TCACCGACAT CGGCTATCAG
GCCGGATTCT ACGACCAGGC CCATTTCATC CGTGAGTTCA AGCAAGTGAT TGGCATCACC
CCGGGGCAAT TCCGAAGCAA GGCGTTGCTT AGGCGCTGA
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| Protein sequence | MSTLPHLGFQ VYQPCAPLLP YVRCYWQITR IAAPETRSTE FMHPEGGTGI IFNFGAPMHF
DGWQHRAQCL VTGPTKQSTR LELSGRVDAL GIRFWPGAGR AFLKTPLSEM LGQTLTPADL
SLALLSDELA ERLAVLPTAP ERIALLETRL LHYLTAHGSQ TQTTEPSMKY ALNWIAEQKG
QGEIRNLLTE IDISQRQLER LFQQNLGMSP KNYSILQRTG FARELLKSDT DSPLTDIGYQ
AGFYDQAHFI REFKQVIGIT PGQFRSKALL RR
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