| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2708 |
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| Symbol | |
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| ID | 4604955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3239991 |
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| End bp | 3241058 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782119 |
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| Product | putative signal peptide protein |
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| Protein accession | YP_928580 |
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| Protein GI | 119775840 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1073] Hydrolases of the alpha/beta superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.849399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAACAT CCATCACCAC ACTGGTACTG GGCACCTTAC TTGGTACTAC AGGCGCATTC
CTGCCAATGG ATGCGCAGGC ACAAACTACC GGGCTGCAAC TGCCACCATC AAGCAGCGCC
AATAATTTTT ATCGGAGCAA TCGTCTGCAA ATGCAAAAAG TCACCTTTAA AAATCAGTTC
CGTATGAATG TCACCGGCAA CCTCTACCTG CCAAAAGACA TCAAATCAGG AGAGCGCAGA
CCGGCCATCA TCGTTGGCCA CCCCATGGGT GCAGTAAAAG AGCAAAGCGC CACGCTTTAT
GCCCAGAAAC TGGCCGAGCA AGGCTTTATC ACACTCGCTA TCGACCTGTC GTTTTGGGGC
GAAAGCGAAG GCAGTCCACG CAATGCGGTA CTGCCCGATA TGTATGCCGA AGATTTCAGT
GCCGCCGTTG ATTTCCTCGG TACCAGCCAG TTTGCCGATC GGGATCGGAT CGGCGTGCTC
GGGATCTGTG GCAGTGGCGG TTTCGCCATC AGCGCCGCCA AAATCGACCC TCGCCTGAAA
GCCATTGCCA CCGTCAGCAT GTACGACATG GGAGGCTTTA GTCGCCATCT CTACGGCAAG
TCCCAGTCGA TGGCGCAACG CAAGCAGGTG CTCGCGGATG CGGCAGCGCA GCGCTATGTG
GAATTCAGCG GCGGAGAAAC CAAATACACA GGCGGTACTC CCCACGAAAT TGACGACAAC
TCTCATCCCA TTGCCAGGGA GTTCTATGAC TTTTATCGCA CACCCCGAGG CCAATTTACG
CCGGAGGGTG CCAGTGCTGA GCTGACCACC CACCCCACAC TGAGCAGCAA CGTCAAGTTT
ATGAATTTCT ATCCGCTCAA TGACATAGAA AGCATCTCAC CGCGCCCTCT GCTGTTTATC
AGCGGTGAGA ATGCCCACTC GATTGAATTC AGTCAGGAAG CCTACGCCCT GGCCGCTGAG
CCCAAAGAGC TGTATCTGGT CAAGGATGCC GGACACGTAG ACCTATACGA CCGCACGGCC
TTGATCCCCT TTGCCAAACT CACCGAGTTT TTCAGCACCA AGCTGTAG
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| Protein sequence | MKTSITTLVL GTLLGTTGAF LPMDAQAQTT GLQLPPSSSA NNFYRSNRLQ MQKVTFKNQF
RMNVTGNLYL PKDIKSGERR PAIIVGHPMG AVKEQSATLY AQKLAEQGFI TLAIDLSFWG
ESEGSPRNAV LPDMYAEDFS AAVDFLGTSQ FADRDRIGVL GICGSGGFAI SAAKIDPRLK
AIATVSMYDM GGFSRHLYGK SQSMAQRKQV LADAAAQRYV EFSGGETKYT GGTPHEIDDN
SHPIAREFYD FYRTPRGQFT PEGASAELTT HPTLSSNVKF MNFYPLNDIE SISPRPLLFI
SGENAHSIEF SQEAYALAAE PKELYLVKDA GHVDLYDRTA LIPFAKLTEF FSTKL
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