| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2694 |
|---|
| Symbol | |
|---|
| ID | 4604941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 3221488 |
|---|
| End bp | 3221988 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639782105 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_928566 |
|---|
| Protein GI | 119775826 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGAGCCT TTACCTTGTA CGCCACGATT TTACTGCTGC ACCTACTGGG GGCAATTCTC
TGGACAGGTG GCCATTTGGT TTTAACCTTA AGCATCCTGC CCGCCGCCCT GAAAAACAAA
GATCCTCAAC CTTTACTGGA TTTTGAATCG CGCTTTGAAA AACTGGCCAT GACAGCCCTT
GCGGTGCAAG TCACCACAGG CATGATGCTG GCGCGCCACT ATTTGCCCAA CCCTGCACTC
TGGTTTGCCG AGGCTCAGCC GTTTTCGGCC ATCATCAAGA CCAAGTTACT GCTGTTGCTG
CTGACACTCC TCACGGCCCT GAGTGCCAGG TTCAGGGTAC TGCCCCAGCT GGTCGCCGAG
GCTTCATGCC ACACCCGCGA TAAAACCAAC AGTCACCTGC TGTACACCAT GGCTGGTCAC
ATCGTTGTTG TGACCCTACT GGCGATGGCC TTTGTTATCA CAGGTCTGAG CGTGCGCACC
GGCTGGCTGT ACCAGCACTA A
|
|---|
| Protein sequence | MGAFTLYATI LLLHLLGAIL WTGGHLVLTL SILPAALKNK DPQPLLDFES RFEKLAMTAL
AVQVTTGMML ARHYLPNPAL WFAEAQPFSA IIKTKLLLLL LTLLTALSAR FRVLPQLVAE
ASCHTRDKTN SHLLYTMAGH IVVVTLLAMA FVITGLSVRT GWLYQH
|
|---|
| |