| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2552 |
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| Symbol | |
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| ID | 4604799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3060871 |
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| End bp | 3061431 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639781947 |
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| Product | OmpA-like transmembrane domain-containing protein |
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| Protein accession | YP_928424 |
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| Protein GI | 119775684 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.508758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTAT TCAGTTTAAG TGTAATGAGT ACACTGATAG CGATGGGGCT TGCCAGTGCT
GAAGTAAAGG CAGAAGCCAG TCCTCATATC ACCGGGGTAA ACCTGGGTTA CGGCACTCAG
GAATATGAGA GCCGTGATGG CGAGCGCTGG GATGCCGGTG ACGGATTCAA GTACGACATT
TGGTACAGAT ACATGCTGAC CAGCCATTGG GGCGTTGAAC TCAGCTATGG TCAGGGCACT
GGCGGCGCTT ACAGTGCCAT GTTCGATATA CTCTCGGACG TGAGAGAGCT TGAGTACTCG
AACTACCGCG CAGCCCTTTA CGGCCAATAC AACTTCTCCC GTGGCAACAG CGTCTATGCC
AAAGCCGGGA TGGCTTTTTC TGATATCACA TATGATCTGG ACGATTCCCG CATTAAAGAA
GATGCGGAAG GCTTTTTTGG CGCGGTTGGT TGGCAGCACA GATTCCACTC AGGATTTGGA
CTGGGAGTCG AATACCAGTA CACAGATCTG AAGCAGCTCG AAGTTCAGAG TATTAATATC
GCCTTCTCCT GGCAGTTTTG A
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| Protein sequence | MKLFSLSVMS TLIAMGLASA EVKAEASPHI TGVNLGYGTQ EYESRDGERW DAGDGFKYDI
WYRYMLTSHW GVELSYGQGT GGAYSAMFDI LSDVRELEYS NYRAALYGQY NFSRGNSVYA
KAGMAFSDIT YDLDDSRIKE DAEGFFGAVG WQHRFHSGFG LGVEYQYTDL KQLEVQSINI
AFSWQF
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