| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2538 |
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| Symbol | |
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| ID | 4604785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3046448 |
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| End bp | 3047647 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781933 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit B |
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| Protein accession | YP_928410 |
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| Protein GI | 119775670 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1805] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB |
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| TIGRFAM ID | [TIGR01937] NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0236214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTGA AAGATTTTCT TGAGCGTATT GAACCGCAAT TTGAAAAAGG CGGTAAATAC
GAGAAGTGGT ATGCCCTGTA TGAAGCGGCC GCCACTATTT TCTATACGCC AGGTCTGGTG
AACAAGGGCA AGACCCACGT TCGCGATAAC CTCGACCTCA AGCGTATGAT GATCACCGTG
TGGGCCTGTG CCTTCCCGGC GATGTTTGTT GGTATGTACA ACGTAGGTCT GCAGGCTCAG
CTGGCGCTGG CCGCCGGCTT CGCGACTCCA GACGTATGGC AGGTTAGTCT GTTCGGTATT
CTCGGTACTG AAATGACCGC CGATGCCGGT TGGGCCACCC TGATGTGGTA TGGCGCCTGT
TTCTTCCTGC CTATCTATGC CGTGACTTTC GCGGTGGGTG GTATCTGGGA AGTGCTGTTT
GCCATGGTGC GCGGCCACGA AGTTAACGAA GGCTTCTTCG TAACCTCTAT CCTGTTCGCC
CTGACACTGC CTGCCACTAT CCCGCTGTGG ATGGTTGCCC TGGGCATTAC CTTCGGTGTG
GTGGTTGCCA AAGAAGTGTT CGGTGGTACC GGACGTAACT TCCTGAACCC TGCGCTGGCC
GGTCGTGCCT TCCTGTTCTT TGCCTATCCG CTGAACATGT CAGGTGACAC CAGCTGGGTT
GTGGCTGATG GTTTCTCCGG TGCAACTCAC CTGAGCCAGG CTGCTACCGG TGCCCTGGAT
TACAGCCTGA ACCAGGACTG GTGGAATGCC TTCTTCGGCT TTATCCCAGG TTCTGTAGGT
GAAGTATCGA CTCTGGCAAT TCTGCTGGGC GGTTTGGTCA TCATCTATAC CCGTATCGCT
TCCTGGCGCA TCGTGGGTGG TGTACTGGTC GGTATGATTG CCGTTTCCAT GTTGCTGAAC
CTGATTGGCT CTGACACCAA CCCCATGTTT GCCATGCCTT GGTACTGGCA CCTGGTACTG
GGTGGTTTTG CCTTCGGTAT GATGTTCATG GCAACCGACC CTGTGTCTGC CTCTTTCACC
AACCAGGCCA AGTGGGCCTA CGGTATCCTG ATCGGTGCCA TGGCGGTGTT CATTCGTGTG
ATCAACCCTG CGTTCCCTGA AGGTATGATG TTGGCCATCC TGTTTGCCAA CCTGTTTGCG
CCACTGTTCG ACCATTTCGT GGTACAGGCA AATATCAAGC GGAGGATTGC CCGTGGCTAA
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| Protein sequence | MSLKDFLERI EPQFEKGGKY EKWYALYEAA ATIFYTPGLV NKGKTHVRDN LDLKRMMITV
WACAFPAMFV GMYNVGLQAQ LALAAGFATP DVWQVSLFGI LGTEMTADAG WATLMWYGAC
FFLPIYAVTF AVGGIWEVLF AMVRGHEVNE GFFVTSILFA LTLPATIPLW MVALGITFGV
VVAKEVFGGT GRNFLNPALA GRAFLFFAYP LNMSGDTSWV VADGFSGATH LSQAATGALD
YSLNQDWWNA FFGFIPGSVG EVSTLAILLG GLVIIYTRIA SWRIVGGVLV GMIAVSMLLN
LIGSDTNPMF AMPWYWHLVL GGFAFGMMFM ATDPVSASFT NQAKWAYGIL IGAMAVFIRV
INPAFPEGMM LAILFANLFA PLFDHFVVQA NIKRRIARG
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