| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2534 |
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| Symbol | |
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| ID | 4604781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3043112 |
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| End bp | 3044368 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639781929 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit F |
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| Protein accession | YP_928406 |
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| Protein GI | 119775666 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.508518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.948189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTC TTGGTATTTT TAAATCTACT CCACTCGAGG TTTACCTCGG TGTGAGTATG
TTTACCGCCA TCGTACTGGT GTTGGTGCTG GTGATTTTGT TCGCCAAATC CAAGCTGGTT
TCCAGCGGTG ACATCACTAT TGGTATCAAC CACGATCCCG ACAAAGCCAT CAAAACTGCT
GCTGGCGGCA AGCTGCTCGG TGCATTGGCA AACAGCGGTA TCTTCGTATC ATCAGCCTGT
GGTGGCGGTG GCTCTTGTGG TCAGTGCCGT GTGCATGTGA AGTCTGGTGG TGGCGACATT
CTGCCAACTG AACTGGACCA CATTTCCAAG GGCGAAGCCA AGAAAGGTTG TCGTCTGGCG
TGTCAGGTTA ACGTAAAAAC CGACATGGAA ATTGAGCTGG AAGAAGAAAT CTTCGGTATC
AAGAAGTGGG ACTGTACTGT TATCTCCAAC GATAACAAGG CAACCTTCAT CAAGGAACTC
AAGCTGGCTA TCCCTGATGG TGAGTCTGTA CCTTTCCGTG CCGGTGGTTA CATCCAGATT
GAAGCCCCTG CTCACCATGT TAAGTACGCC GATTTCGACG TACCTGAGAA ATATCGTGGC
GACTGGGAAC ACTTCGGTTT CTTCAAACTG GAGTCCAAGG TTGATGAGCC GGTGATCCGT
GCTTACTCCA TGGCCAACTA CCCTGAAGAG TTTGGCATCA TCATGCTGAA CGTGCGTATC
GCTACGCCTC CACCACGTAA CCTGAGCCTG CCTTGCGGTA AGATGTCTTC TTACATCTGG
AGCCTGAAGG CCGGCGACAA GGTGACCATC TCCGGTCCAT TCGGTGAGTT CTTCGCCAAG
GACACTAACG CTGAGATGGT CTTTATCGGT GGTGGTGCAG GTATGGCCCC AATGCGCTCG
CACATCTTCG ACCAACTTAA GCGTCTTAAG AGCAAGCGTA AGATGAGCTT CTGGTACGGC
GCCCGTTCAA AACGCGAAAT GTTCTATGTA GAAGATTTCG ACGGTCTGGC GGCCGAGAAT
GATAACTTTG TGTGGCACGT GGCCCTGTCT GATCCTCAGC CAGAGGACAA CTGGAACGGT
TACACCGGCT TCATTCACAA CGTACTGTAC GAAAACTATC TGAAAGACCA TGAAGCTCCA
GAGGATTGTG AGTTCTACAT GTGTGGACCT CCAATGATGA ACGCGGCAGT GATTGCCATG
CTCAAAGACC TCGGTGTTGA AGACGAAAAC ATCCTGTTGG ATGACTTCGG CGGTTAA
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| Protein sequence | MDILGIFKST PLEVYLGVSM FTAIVLVLVL VILFAKSKLV SSGDITIGIN HDPDKAIKTA
AGGKLLGALA NSGIFVSSAC GGGGSCGQCR VHVKSGGGDI LPTELDHISK GEAKKGCRLA
CQVNVKTDME IELEEEIFGI KKWDCTVISN DNKATFIKEL KLAIPDGESV PFRAGGYIQI
EAPAHHVKYA DFDVPEKYRG DWEHFGFFKL ESKVDEPVIR AYSMANYPEE FGIIMLNVRI
ATPPPRNLSL PCGKMSSYIW SLKAGDKVTI SGPFGEFFAK DTNAEMVFIG GGAGMAPMRS
HIFDQLKRLK SKRKMSFWYG ARSKREMFYV EDFDGLAAEN DNFVWHVALS DPQPEDNWNG
YTGFIHNVLY ENYLKDHEAP EDCEFYMCGP PMMNAAVIAM LKDLGVEDEN ILLDDFGG
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