| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2447 |
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| Symbol | |
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| ID | 4604696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2945111 |
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| End bp | 2946454 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639781844 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | YP_928321 |
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| Protein GI | 119775581 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTCG ATTCTCTGGG ATTGGCAGCA CCTCTGCTGC AGACGCTGAT ACAGTGCGGA
TATCGTACGC CAACCGAAAT TCAGGCCCAG AGTATCCCTG TGCTCCTCAG TGGCCGGGAT
TTGATTGCGG TAGCCCAAAC CGGCAGCGGG AAAACGGCGG CCTTTGCGTT GCCGATATTG
AAGCAGCTCT CGGACAAGGG GCTGCGTGGC GGGATACAGG CGCTGGTGTT GGTGCCAACC
CGGGAGCTGG CTGTGCAAGT GGCCGATGCC TTTACGCGCT ACAGTGCCGG GTTGGGGCTG
ACGACCCTCG CCGTTTACGG TGGGGTGAAT ATCCGTCCCC AACGCCAGGC GCTGGCCGCC
GGGGTGGACA TACTGGTGGC CACACCGGGG CGGCTGTTGG ATTTGACCGG TCAGTTTGGT
CTGTCTCTTG CGAGTGTCGG CACCCTTGTG CTGGATGAAG CCGACCGCAT GCTGGATATG
GGGTTTGCCC CCGACATAGA AAAGATACGC CGCCAGCTGG GGCCGCATCA AAGTGCCATG
TTTTCAGCAA GCTTTGCCCA GCGGGAGCGT GAACTGGCTG AGCGCTGGCT CTCCAATGCA
GTCAGCCTTG CCGCCAAAGA CACCGGCCGT ATTCCACAGC AGCTTGCCCT CGAAGTCTTT
ATGCTCGATA AGCCCAGATG GGCCGAGTTT GTCGCCGAGC TGGTGGGAAA GCGCAACTGG
CGCCAGGCGC TGGTGTTTGT CTCCTCCCGG GAGGAGTCCA ATACCCTGGT GGCAGAACTG
GCCCTCGATG GGCTGCAGGC GGCCGCATTT CATGGTGAGA AAACCCAGGG TGCCAGACGG
CGCGGTCTGG ATGAGTTCAA ATCCGGCAAA CTCAGATTGC TGGTGGCAAC CGACGTGGCA
GCCAGGGGGC TGGATATCGA AGACTTGCCC GTGGTAATAA GTCTTGGGTT GCCCCACGGT
GAAGAAGACC TGATACATCG CCTTGGCCGC AGTGCCCGAG CCGGCCGGGA AGGCCTGGCT
GTGATCGTCT TGTCACCTGA GATGCGCGCC GATTTGCCGC TGCTGAAAGC GCTTTGCCCG
GCACTGCCAG AGGTGATCAC CCCTGAGGGA TACAGCCCTA AAGACCCATT GCCCCAGCGA
TATCGCGACG GGGCTTTATC AACGCCGGGA AGCAAGCCTG CCAATAGGTC TGGGCGAAAT
GCAGGGCAGC GCCCAGGCAC TCGCACAGGT AGCCGCACGG GCAGTCGTAC AGGTGGACGG
ACTGGCAGCA GCAATGGCTC ACCGCGGCAA TCAGGAAAAC CTGCCCGGCA AGGAAACGCT
CCAAAGCGGC AAGCCCGGGG CTGA
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| Protein sequence | MSFDSLGLAA PLLQTLIQCG YRTPTEIQAQ SIPVLLSGRD LIAVAQTGSG KTAAFALPIL
KQLSDKGLRG GIQALVLVPT RELAVQVADA FTRYSAGLGL TTLAVYGGVN IRPQRQALAA
GVDILVATPG RLLDLTGQFG LSLASVGTLV LDEADRMLDM GFAPDIEKIR RQLGPHQSAM
FSASFAQRER ELAERWLSNA VSLAAKDTGR IPQQLALEVF MLDKPRWAEF VAELVGKRNW
RQALVFVSSR EESNTLVAEL ALDGLQAAAF HGEKTQGARR RGLDEFKSGK LRLLVATDVA
ARGLDIEDLP VVISLGLPHG EEDLIHRLGR SARAGREGLA VIVLSPEMRA DLPLLKALCP
ALPEVITPEG YSPKDPLPQR YRDGALSTPG SKPANRSGRN AGQRPGTRTG SRTGSRTGGR
TGSSNGSPRQ SGKPARQGNA PKRQARG
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