| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2435 |
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| Symbol | |
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| ID | 4604684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2928664 |
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| End bp | 2929545 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781832 |
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| Product | geranyltranstransferase |
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| Protein accession | YP_928309 |
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| Protein GI | 119775569 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.408518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAC TTGCCCTCGC CGACTGTCAG TCCCGGGTCG ACGCTGTCCT TGCCGCACAT
ATAGATGCAT TGCCTCAAAC CGCCCCCGCG TTGAAGGCCG CCATGCGCCA TGGTGCCCTG
ATTGGCGGTA AACGTATACG CCCCTTCCTT GTATACGCCG TGGGTGAATT GCTCGGGGTA
GATAAGGCCA AGCTGGACCG ACTCGCCGCC GCCGTTGAAT GTGTTCATGC CTATTCCCTT
ATCCATGATG ATTTGCCCGC CATGGATGAC GACAACCTGC GCCGTGGCAA GCCTACGGTA
CACATTGCCT TCGATGAAGC CACGGCAATA CTCGCCGGTG ATGCGTTGCA AACACTGGCC
TTTGAAATCA TCAGTGAATC CGATGCAGGC CTCGCCCCAA AAGCGCAGGT CGCCATGATT
GCGGCCCTGG CAAGGGCATC GGGATATCTG GGTATGTGTG GCGGGCAGGC ACTGGATCTT
GCTGGTGAAG GCAAGAGCAT CAGCCTCGAT GAACTGACCC GGCTGCACAA CCTGAAAACC
GGCGCCCTTA TTCGTGCTGC CGTGGAGCTT GCGCTGATTG CCGCCGATGC CTCCGATGCC
GACACGGCGG CACTTCGTGC CTATGCCGAT GCCATTGGTC TTGCGTTTCA GGTTCAGGAC
GACATCCTGG ATATCACGGC TACCACCGAA GAAATCGGTA AGCCGCAGGG TTCTGATCTG
GATGCCAACA AGAGCACGTA TCCTAAGTTG TTGGGACTCG ATGGCGCCCG GCAAACTGCC
GATGCACTGG TAGCCGACGC ACTATCAGCG CTGGCCAAAA TGCCATACAA TAGTCAGCTA
CTTGCAGACT TCGCCCGTTA TATCGTCGCG CGACGAGTAT AA
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| Protein sequence | MLKLALADCQ SRVDAVLAAH IDALPQTAPA LKAAMRHGAL IGGKRIRPFL VYAVGELLGV
DKAKLDRLAA AVECVHAYSL IHDDLPAMDD DNLRRGKPTV HIAFDEATAI LAGDALQTLA
FEIISESDAG LAPKAQVAMI AALARASGYL GMCGGQALDL AGEGKSISLD ELTRLHNLKT
GALIRAAVEL ALIAADASDA DTAALRAYAD AIGLAFQVQD DILDITATTE EIGKPQGSDL
DANKSTYPKL LGLDGARQTA DALVADALSA LAKMPYNSQL LADFARYIVA RRV
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