Gene Sama_2386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2386 
Symbol 
ID4604635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2866727 
End bp2867065 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content50% 
IMG OID639781783 
Producthypothetical protein 
Protein accessionYP_928260 
Protein GI119775520 
COG category[S] Function unknown 
COG ID[COG2914] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.631868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGTG ATATCGAAAA ATTCGGGGTA GATGTGGTGT ATGCCTTACC CCACAAGCAA 
AAAGTGATTC ATGTGATGGT GTCACCGGGC ACCACCTTTA TTGAGGCTGT TCGTCAAAGT
AATATCTGCA GCTTTTTCCC GGAGATTGAG CTCGACTCAG TGAAACTTGG CAGTTTTAGC
CGCTTGGTAA AGCATGACGA CCAATTGCAA CCGGGAAACC GGGTTGAGAT CTATCGCCCC
TTGATTGCCG ACCCTAAAGA CGTCAGACGC CAGCGGGCGG AAAAAGCCAA GGACGAGGGG
CGTGCAAGCA AGGTAACAGG TGGCAAAATC CAATCCTGA
 
Protein sequence
MASDIEKFGV DVVYALPHKQ KVIHVMVSPG TTFIEAVRQS NICSFFPEIE LDSVKLGSFS 
RLVKHDDQLQ PGNRVEIYRP LIADPKDVRR QRAEKAKDEG RASKVTGGKI QS