Gene Sama_2355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2355 
Symbol 
ID4604605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2828187 
End bp2831537 
Gene Length3351 bp 
Protein Length1116 aa 
Translation table11 
GC content50% 
IMG OID639781753 
Producthypothetical protein 
Protein accessionYP_928230 
Protein GI119775490 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.768213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTGGG TCAAGGGAAA GCTCGGTCAG GGATACTCAG GTTGGCAGCC ATACGGGGCT 
TGGAGCAATC CACCACAAGG TGTCATAGAT ACTCTTATTT CTGCCCCTGG AGTGACGATT
AAACTGCCGT CAGGAATGGG CCAAAATCTC AGTATTGAGG ATGCTATCAA TCCCATGCGG
GATCTAATCA GGTCGACTAA CAAGGCTGTT CGTATCACAG GGTTGTCTGG CGTAGGAAAA
ACCAGAATCG TGCAGGCGCT CTTTGATGAA ACGATTGGCA CGGGCGCTCT CGACCGAACC
ATAGCTGTCT ACGTTGATAC CGGTGCCGAG CCTGAACCAT CTGCAACGGC GATGCTAGAT
AGACTAATTG CCGAGGGGCG ACGAGCAATT ATGGTCCTCG ATAATTGCCC ATCAGAACTA
CACTCTTCAC TGGCCAGCAA AGTATCAGCC ACAAGTGGTA AGGTAAGCCT CATCACGGTT
GAGTATGACA TCAGAGACGA TAAGCCGCAG ACGACTGAAG TAATACACAT AGAGGCGGTC
GGGCCGGAGG TGGCCGAACA GCTTGTAAAT CGCCGCTTCC CTGGCATCGG TCAGATTAAC
GCCCGCCGAA TAGCTGTGTT TGCAGATGGG AATGCAAGGG TGGCCCTGGC AATCGCCGAG
AGGGTAGAGG AAGGCGAGAG CTTGGCCCAA CTTTCTGACA CCCAGTTGTT TAACCGCTTG
TTTGAACAGC GCAACCATCC AGACGAAAAT CTTCGGGAAC AAGCTGAAAT ACTGTCTCTG
GTATATTCGT TCTCGGTATC AATTCCTAAA GACGCTCACT GCGAGTTGGA AGTGCTGAGT
TCGCTATCGG GATATTCCCA GACCCAATTG TTTCGAACTG TCAGCAAGTT ATTGGACCGT
CATGTCGTAC AGAAGAGGGG GTATTGGAGG GCAATACTGC CCCATGCCAT TGCGAATAAA
CTGGCTGCAT CTGCACTTAA TAGTATCCCG ATTGAACAAC TCAGGTTGAC CTTTGAAGCC
GCTGGCCGAC AACGTTTGCT ACTGTCGTTC GCACACAGGT TGGGGCTGTT ACACGATCAC
TCAGTGGCGA AAGAGATCGT TGAGGCTTGG CTTCAGCCAG ATGGGCTGCT GGGGCGGATG
ACAGAGTTGA ACGAAATGTC AGCACGAATG CTGGCCTATA TCGGCCCGGT TGCGCCTGAA
GCACTGCTCG ACAGGATCGA AGCCGAGCTT ACCGCCTCTG ATTTTAAAGG TATGAAGCCG
AGTTATAATT CACGGCGGAC AACCATTCTC AATCTTTTAC AATCACTGGC GTACGAACCA
AATGCCTTTG AGCGTTGCGT TAGACTTTTA ATTCGTGTGG CGGATTTTGA AGAAGAGAGC
AACAACTACG ACGCAGCTCG CAATAGAATC ACGCGATTTT TCCAACCATA TCTGTCTGGC
ACGCATGCGT CTTTGGAACA GCGCATTGCG ATCATGAATG AATGTCTTTC ATCAGACGTT
GCGGGACGAA GGTCGTTGGG TTTTGAGATG CTCTCGACTG CCCTAGATGG GCCGCCGTGG
TCAGGGTCTG GTATGAACGA ATTTGGTGCT CGCCCAAGAG ACTATGGCTT TTACCCTAAT
CACTATGAGC TGGTGGAGTG GCGCAACGCC TTTATCGAAG TTGCAGTGCG GTTGGGAATC
GCTGGCAATC TTGATTTTGA AGTCCCTGCA CGACAGATCC TGGCGGACAA ATTTAGAATA
ATGTGGCGCC AAAAAGGGAT GAGGGACAAG CTTGTCGATG CTGCTCGCCA GCTTCATTCC
CATCATCCTT GGAACGAGGG TTGGAAAGCT GTTCGTTCCA CGATTTATAT CGACTACACC
AAGCGTAAAG ACAAGGATGG TTTTGAGGTG CTACCGGAAA ACCTTGTCGC ACTGGAGAAG
GAGTTGGAGC CTCAGGACTT GATTTCATCA ATTCTGACAT TTGTCCTGGG TCAGGGGCAT
GACTATTGGG CCCTTGATCC CGATTTTGAT CATGAAAGCA CTATTAAATA CGGTGAAGTT
TCGAAAAGAC TAGATGCCAA GGCACTTAAA TTGGGTGAGG ACTTTGCTGC ATCAGACCAT
ACGCTTGACG AGTTGGGTCC CAATTTGTTC TCCAATAATT GGATGCCCTA TCGAGCCGTA
TTCGGGAGAG GACTGGCAAA AGGGGCTTTA GATAGGAGAG TTGGTTGGCT TCTGCTAGTT
GAACAATTGA AACATCAGCC AGGGGCCAAC AGAAATTTTG CAGTGTTTTG CGGCTTCATT
GACGAAATTG ATTCTGTCGA TTCTTTATTA GCACAAGAGC TACTTGACGA ATGCGCACTG
CATCCTGAAC TTAGACACGT ATTGGTCGAC TTGCATCCCC AACGGGAGTT CACAGAAACC
GATTTGGATC GCTGCATCGC GATTCTGGAT GACCCTGACA TTCATCCTCA CATGTATGGA
CCAATCTTAT GGAGGGGGTC GTATGCAAAT TTGCCCAGAG AGCGTGTTCT CAATCTTGCT
CAGCGACTGC TAAGTAAACC GAACGGCGAT AATGTTGTTT TGGATGCCCT AAGCATGAGG
GAACATGGCA AAGATAAAAC TGTGGATACG CTTGGTTCTG ACTTTCGGCA GATAGGCCTA
AGGGCTGCAA TACAAAGGAT CCTAAGAGGT GGGCAAGATT CCGGCGGATC TATAGACCAT
CACATGGAGT GTGTAGTCGG AGCAGCTTTG CGCTTTGATG GCAATGAAAC CGAAAAGTTG
GAGTGGATGA ATACTATTTT TGCGGTTGTA GATGAACGCT ATGGTTACGT TTATGCCTTT
GAAAATGCAA TTGAGACCAC CGCTGCATTG ATGCCAGAAG CGTTCCTTAA TCGCGTCTTT
GAGGGCACAG AAGAACAACA ACATCGACGA CAGTTTTTTA TTAGCCATGA AGGCCTGCAT
GGCTCTCCTC TCGCAAAAAT TAATGTGGAA GTATTGCTTG AGTGGTGCCG TGCCAGAGAC
GATAGCAGCG TGTGGGCTTC TGTCGCTGCG GGTATCAGCC TTTGGTCAAA TGATGGAGAG
CTGGGGATTG TTACTATGTC GGTTTCAGCC ACTAGGCTGC TGGAAGCTGC TCCTGAGCCA
GCATCTATCC TAGAGGTATT CGCCGAGCGT GTCACGCCTT CATCTTGCTC AGGTAGCCTA
GCAGATGCGA TGCAAGTCAG AGCGGATGCG ATTGTCACGT TGGTTGAGCA CAAAAGCCCG
GAGATCGCTG AGGCTGCTAA ATCAGTGTCA GCAAAGCTGA TTGAGCGGAT TAAATACGAG
AAGTTGCGAG AACAGCAAAT TGATGAGGAT CGTGAACAGC GGTTTGAGTG A
 
Protein sequence
MLWVKGKLGQ GYSGWQPYGA WSNPPQGVID TLISAPGVTI KLPSGMGQNL SIEDAINPMR 
DLIRSTNKAV RITGLSGVGK TRIVQALFDE TIGTGALDRT IAVYVDTGAE PEPSATAMLD
RLIAEGRRAI MVLDNCPSEL HSSLASKVSA TSGKVSLITV EYDIRDDKPQ TTEVIHIEAV
GPEVAEQLVN RRFPGIGQIN ARRIAVFADG NARVALAIAE RVEEGESLAQ LSDTQLFNRL
FEQRNHPDEN LREQAEILSL VYSFSVSIPK DAHCELEVLS SLSGYSQTQL FRTVSKLLDR
HVVQKRGYWR AILPHAIANK LAASALNSIP IEQLRLTFEA AGRQRLLLSF AHRLGLLHDH
SVAKEIVEAW LQPDGLLGRM TELNEMSARM LAYIGPVAPE ALLDRIEAEL TASDFKGMKP
SYNSRRTTIL NLLQSLAYEP NAFERCVRLL IRVADFEEES NNYDAARNRI TRFFQPYLSG
THASLEQRIA IMNECLSSDV AGRRSLGFEM LSTALDGPPW SGSGMNEFGA RPRDYGFYPN
HYELVEWRNA FIEVAVRLGI AGNLDFEVPA RQILADKFRI MWRQKGMRDK LVDAARQLHS
HHPWNEGWKA VRSTIYIDYT KRKDKDGFEV LPENLVALEK ELEPQDLISS ILTFVLGQGH
DYWALDPDFD HESTIKYGEV SKRLDAKALK LGEDFAASDH TLDELGPNLF SNNWMPYRAV
FGRGLAKGAL DRRVGWLLLV EQLKHQPGAN RNFAVFCGFI DEIDSVDSLL AQELLDECAL
HPELRHVLVD LHPQREFTET DLDRCIAILD DPDIHPHMYG PILWRGSYAN LPRERVLNLA
QRLLSKPNGD NVVLDALSMR EHGKDKTVDT LGSDFRQIGL RAAIQRILRG GQDSGGSIDH
HMECVVGAAL RFDGNETEKL EWMNTIFAVV DERYGYVYAF ENAIETTAAL MPEAFLNRVF
EGTEEQQHRR QFFISHEGLH GSPLAKINVE VLLEWCRARD DSSVWASVAA GISLWSNDGE
LGIVTMSVSA TRLLEAAPEP ASILEVFAER VTPSSCSGSL ADAMQVRADA IVTLVEHKSP
EIAEAAKSVS AKLIERIKYE KLREQQIDED REQRFE