| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2333 |
|---|
| Symbol | |
|---|
| ID | 4604583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 2799182 |
|---|
| End bp | 2800171 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639781731 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_928208 |
|---|
| Protein GI | 119775468 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.132174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.560629 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAC TATTGGCTGA TAAACTCCCG ATTGGTGGTG AGCAAGAAAT AGCTTTTGAT
GGCCTATATT ATGGGACTAC AAACAGTGGA CGCTCGTCGC TTCGTTGGGC ATTGCACTCT
ATGGATCTAT ACGCCAAGCG AATACTGGTT CCTGATTTTG TGTGCCAAGT GGTTATTGAT
GTTTTGCTGG AGTTCTCTAT ACAACCTGTG TTTTATGAGG TCGGGCTGGA TTTAGACTTC
AAGTTACCTA CAGATGCAAA AAATTGTGAC GCGCTATATT TAGTTAAATA CTTTGGCCAC
AGTTCAAAAT CTTTTAGCAT AGCGCTAGAG CAGTCGAATA TTCCATTGAT AATTGACACA
GTGTTCGATG CTGAACTACC AACTGTAAAA ACAAATAGCC ACTGGTGTGC ATTTAACAGC
CTAAGAAAAA TATCCAGGAT TGCTGACTAC AGCCAACTAG CCTCAAACAA ACCACTTATT
CCAATCGAAC GCACCAGATT GGAAACTTTT TCCAGGTTGA AGTATCAAGC TAAAAATATA
AAACATCAGT TTTTAACTAA AAAAATTGAA AGCGAAGAAC GTTACTTGAA TCTATTTTCA
GATGCTGAAT CCATCCTTGA TGATAGCAAG GGAGTCTATT ATCCGGAAGA TAATAGTATA
TTTTTATCAA ACATTTTTCA CCACAACCTT TCAGCTGAAA CAGAGCTAAG ACGTTCTAAT
TTGGAGATAG CAAAAGCAAC CCTTAGCGAT GTCACATATA TAGACATCAA CCCTTGCTTA
CCGAGTTTCC TGCCAATACT TTTAAAAGAT AGAGATAGGG TTAGAGAAAA ACTAAAGAAA
AACCATATGT ACCTAGCTAT TCATTGGCCA TCGCTATCTA CTCTGGGCAA TAAGCTATCA
CCTAACATAC TCTCTATACC ATTAGACTCC AGATATCAGA TGTCTGATAT ACAGCGGATG
TGCCAAATTA TAGCCAAGGA GGCACTGTGA
|
|---|
| Protein sequence | MTSLLADKLP IGGEQEIAFD GLYYGTTNSG RSSLRWALHS MDLYAKRILV PDFVCQVVID
VLLEFSIQPV FYEVGLDLDF KLPTDAKNCD ALYLVKYFGH SSKSFSIALE QSNIPLIIDT
VFDAELPTVK TNSHWCAFNS LRKISRIADY SQLASNKPLI PIERTRLETF SRLKYQAKNI
KHQFLTKKIE SEERYLNLFS DAESILDDSK GVYYPEDNSI FLSNIFHHNL SAETELRRSN
LEIAKATLSD VTYIDINPCL PSFLPILLKD RDRVREKLKK NHMYLAIHWP SLSTLGNKLS
PNILSIPLDS RYQMSDIQRM CQIIAKEAL
|
|---|
| |